Factsheet for AT3G14520.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G14540.1	Thale cress	plastid	87.11	87.54
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	80.83	80.43
CDY67821	Canola	cytosol	22.81	71.13
CDY27296	Canola	cytosol	20.5	63.59
AT3G14490.1	Thale cress	plastid	59.83	60.23
AT3G32030.1	Thale cress	plastid	55.7	55.79
AT3G29410.1	Thale cress	plastid	53.06	53.23
AT1G33750.1	Thale cress	mitochondrion, plastid	51.57	51.74
VIT_18s0001g04200.t01	Wine grape	cytosol	8.76	44.54
AT5G48110.1	Thale cress	plastid	23.47	41.89
AT5G44630.1	Thale cress	cytosol	38.51	41.83
PGSC0003DMT400075074	Potato	cytosol	14.21	41.35
PGSC0003DMT400050941	Potato	cytosol	16.86	40.8
AT3G29110.1	Thale cress	plastid	40.0	40.67
AT4G13300.1	Thale cress	cytosol	36.36	39.71
AT1G70080.1	Thale cress	mitochondrion	39.83	39.44
AT4G13280.2	Thale cress	cytosol	35.37	38.63
AT1G66020.1	Thale cress	plastid	37.69	38.13
AT4G15870.1	Thale cress	plastid	37.52	37.96
AT4G20200.1	Thale cress	plastid	37.85	37.91
AT2G23230.2	Thale cress	plastid	38.02	37.64
AT1G48820.1	Thale cress	mitochondrion, plastid	34.55	37.25
AT4G20210.1	Thale cress	plastid	36.86	37.17
AT3G29190.1	Thale cress	plastid	36.69	36.94
AT1G48800.1	Thale cress	mitochondrion, plastid	36.69	36.82
AT4G20230.2	Thale cress	plastid	37.02	36.19
PGSC0003DMT400070310	Potato	cytosol	18.35	35.69
PGSC0003DMT400047124	Potato	cytosol	18.35	35.69
Solyc01g101190.2.1	Tomato	cytosol	32.07	35.14
PGSC0003DMT400079785	Potato	cytosol	18.02	35.05
Solyc01g101220.1.1	Tomato	cytosol	9.09	32.74
VIT_18s0001g04510.t01	Wine grape	plastid	15.54	30.72
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	15.21	29.68
Os02t0458100-01	Rice	plastid	18.68	28.9
AT4G16730.1	Thale cress	cytosol	23.31	26.16
AT3G25810.1	Thale cress	plastid	25.79	26.09
AT2G24210.1	Thale cress	plastid	25.45	26.06
AT3G25830.1	Thale cress	plastid	25.12	25.33
AT3G25820.1	Thale cress	plastid	25.12	25.33
AT4G16740.1	Thale cress	mitochondrion	22.81	24.42
GSMUA_Achr6P24330_001	Banana	cytosol	5.45	23.4
AT1G61680.1	Thale cress	plastid	20.99	22.32
GSMUA_Achr6P24340_001	Banana	cytosol	5.45	22.15
KRG93110	Soybean	mitochondrion	10.74	21.96
VIT_18s0001g05430.t01	Wine grape	cytosol	16.69	20.95

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:820677	MapMan:9.1.4.2	ProteinID:AEE75534.1	EMBL:AF497489
ArrayExpress:AT3G14520	EnsemblPlantsGene:AT3G14520	RefSeq:AT3G14520	TAIR:AT3G14520	RefSeq:AT3G14520-TAIR-G	EnsemblPlants:AT3G14520.1
TAIR:AT3G14520.1	Unigene:At.39218	ProteinID:BAB02384.1	EMBL:BT053762	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010333
GO:GO:0016114	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
RefSeq:NP_188070.2	PFAM:PF01397	PFAM:PF03936	PO:PO:0001185	PO:PO:0007616	PO:PO:0009009
PO:PO:0009031	PO:PO:0009052	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	UniProt:Q9LUE2	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI00000A76C6	:	:	:	:	:

Description

TPS18Terpenoid synthase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUE2]

Coordinates

chr3:-:4875657..4878338

Molecular Weight (calculated)

69414.3 Da

IEP (calculated)

5.778

GRAVY (calculated)

-0.294

Length

605 amino acids

Sequence
(BLAST)

001: MDATRTFFGL PNVHNVPLCL TSNLSLFPQR LLQKHTLPLK PAKKHHLVCV RSTKSSDDLE GSRPSTYFSP SLWGDHFLSV SLDRGEFDEL EREIETMKPL
101: VKDMLMSSQS SDKEKIRLIH LLVSLGSSYH FDKEIQDILK HSFTKLDDII VGEDDLETIS IMFEVFRLYG HKMSCDAFDR FRGEDGRFKE SLAKDVRGML
201: QLFEVAHLGT PSEDIMDEAS SFAQNHLDSW IGGNVSGATP HLLKHIQNSL YIPRYCNIEV LVAREYISYY EQEEGHNKIL LKFAKLNFNF CQFHYIQELK
301: TLTKWWKDLD LASKLPYIRD RLVESHLGGL GPYFEPHYSL GRIIVAKIIM TMVVVDDTYD AHATVPEVAV LTECLQRLNI GADDKLPDYL RTVLESVFEV
401: MGEIEQEMRP KGRSYGVKQV LERFKNVAKA DKQLTEWART GDVPSFDEYM KVGLVTAGMD GYAGYCFIGM EDVSEKEAFE WLSSNPLIIQ ALNVMFRLAN
501: DVGTYETEIN RGEVANGLNC YMKQYGVTKE EASQELRKIY SNNKKVVMEE FMNSHDHVPR QVLLRCLNFA RLFDVMYTEG DGYSEPKGKI EHFMTSLYVH
601: PIPLS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.