Factsheet for AT4G15870.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18347	Canola	cytosol	20.23	72.89
CDY42473	Canola	cytosol	62.71	66.73
Bra002968.1-P	Field mustard	plastid	42.98	66.58
AT2G23230.2	Thale cress	plastid	53.68	52.54
AT3G29190.1	Thale cress	plastid	50.84	50.58
AT3G29110.1	Thale cress	plastid	49.5	49.75
AT4G20210.1	Thale cress	plastid	49.83	49.67
AT1G48820.1	Thale cress	mitochondrion, plastid	46.49	49.55
AT1G66020.1	Thale cress	plastid	49.33	49.33
AT4G20200.1	Thale cress	plastid	49.33	48.84
AT5G44630.1	Thale cress	cytosol	45.48	48.83
AT4G13280.2	Thale cress	cytosol	44.65	48.19
AT1G48800.1	Thale cress	mitochondrion, plastid	48.49	48.09
AT4G13300.1	Thale cress	cytosol	44.31	47.83
AT4G20230.2	Thale cress	plastid	49.5	47.82
AT1G70080.1	Thale cress	mitochondrion	43.65	42.72
PGSC0003DMT400050941	Potato	cytosol	16.89	40.4
AT5G48110.1	Thale cress	plastid	22.07	38.94
AT3G14490.1	Thale cress	plastid	37.79	37.6
AT3G14520.1	Thale cress	plastid	37.96	37.52
AT1G33750.1	Thale cress	mitochondrion, plastid	37.63	37.31
VIT_18s0001g04200.t01	Wine grape	cytosol	7.36	36.97
PGSC0003DMT400075074	Potato	cytosol	12.71	36.54
AT3G14540.1	Thale cress	plastid	36.12	35.88
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	36.29	35.69
AT3G32030.1	Thale cress	plastid	35.95	35.6
AT3G29410.1	Thale cress	plastid	34.78	34.49
Solyc01g101190.2.1	Tomato	cytosol	30.43	32.97
PGSC0003DMT400070310	Potato	cytosol	17.06	32.8
PGSC0003DMT400047124	Potato	cytosol	16.72	32.15
PGSC0003DMT400079785	Potato	cytosol	16.39	31.51
Solyc01g101220.1.1	Tomato	cytosol	8.7	30.95
Os02t0458100-01	Rice	plastid	18.39	28.13
VIT_18s0001g04510.t01	Wine grape	plastid	14.21	27.78
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.05	27.1
AT4G16730.1	Thale cress	cytosol	24.08	26.72
KRG93110	Soybean	mitochondrion	13.21	26.69
AT4G16740.1	Thale cress	mitochondrion	23.91	25.31
AT2G24210.1	Thale cress	plastid	24.08	24.37
AT3G25820.1	Thale cress	plastid	23.75	23.67
AT3G25830.1	Thale cress	plastid	23.75	23.67
AT3G25810.1	Thale cress	plastid	23.41	23.41
AT1G61680.1	Thale cress	plastid	19.73	20.74
VIT_18s0001g05430.t01	Wine grape	cytosol	15.72	19.5
GSMUA_Achr6P24340_001	Banana	cytosol	4.85	19.46
GSMUA_Achr6P24330_001	Banana	cytosol	4.52	19.15

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:827268	MapMan:9.1.4.2	ProteinID:AEE83660.1	ArrayExpress:AT4G15870
EnsemblPlantsGene:AT4G15870	RefSeq:AT4G15870	TAIR:AT4G15870	RefSeq:AT4G15870-TAIR-G	EnsemblPlants:AT4G15870.1	TAIR:AT4G15870.1
Symbol:ATTS1	Unigene:At.1833	ProteinID:CAA72070.1	ProteinID:CAB10366.1	ProteinID:CAB78629.1	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0010333	GO:GO:0016114	GO:GO:0016829	GO:GO:0046246	GO:GO:0046872	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_193322.2	UniProt:O23651	PFAM:PF01397	PFAM:PF03936
PO:PO:0000084	PANTHER:PTHR31045	PANTHER:PTHR31045:SF4	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000009E88F	EMBL:Y11188

Description

TPS01Terpenoid synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23651]

Coordinates

chr4:-:9008372..9010947

Molecular Weight (calculated)

69623.8 Da

IEP (calculated)

5.724

GRAVY (calculated)

-0.287

Length

598 amino acids

Sequence
(BLAST)

001: MYSISLVVNM QCISAYGSIL SLPLRSNLFS VRKLSSFPHK SFSGQHGKLV RMKATPTRAC HDQESNRKFK RLPLSKWGHH FLSAQVDVSE MNALAQEIER
101: LKPEVGEMLM FSSKSIESTK KRILFIYMLV SLGVAFHFED EIEQSLEEGF EKIQEMIAGE DDLYTISIMF WVFRTYGYNM STDVFKRFKG ENEKFMESIT
201: SDVKGMVSLY EAAHLRTTRE DILEEALSFT TRNLESLARA GASSPHILMR IRNALCMPQH YNAEMIFARE YISFYEQEED HNKMLLRFAK INFKFLQLNW
301: IQELKTLTKW WKQQDLASKL PPYFRDRLIE CYLFAIMIYF EPQFSLGRVS LAKINTVFTL VDDTCDRYGN VSEVAALVQC VERWDPDCMD SLPDYMKTVF
401: KFAWNTFEEC ENAGIMEEGL SYDVQGALEE WEQGDVVPTF DEYLEIGGVE VTMYVSIACS FLGLGQSSRE QAYKWLKSRP KFVEAQAKRA RLMNDIAGFE
501: GDMSRGFDVN AIMYYMKQYK VTEEETFTRL QKMARDLDTT VNEEILKTTK SVPRQILKRA IDFGKMIEFT YRSGEEYTHP EGRFKDHITS LFVDLIRL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.