Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- vacuole 2
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 73.86 | 72.9 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 26.8 | 68.91 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 76.14 | 48.34 |
| VIT_08s0007g06860.t01 | Wine grape | plastid | 35.29 | 37.63 |
| PGSC0003DMT400050941 | Potato | cytosol | 28.43 | 34.8 |
| CDY18347 | Canola | cytosol | 18.63 | 34.34 |
| CDX82477 | Canola | plastid | 29.09 | 29.67 |
| CDY67821 | Canola | cytosol | 18.63 | 29.38 |
| VIT_12s0059g02720.t01 | Wine grape | plastid | 35.95 | 28.35 |
| Bra012515.1-P | Field mustard | extracellular | 22.22 | 27.53 |
| PGSC0003DMT400075074 | Potato | cytosol | 17.97 | 26.44 |
| CDY01639 | Canola | cytosol | 16.01 | 25.39 |
| PGSC0003DMT400047124 | Potato | cytosol | 24.84 | 24.44 |
| Bra027609.1-P | Field mustard | cytosol | 22.88 | 24.31 |
| CDY09325 | Canola | plastid | 21.24 | 24.07 |
| Solyc01g101220.1.1 | Tomato | cytosol | 12.75 | 23.21 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 30.72 | 22.43 |
| VIT_13s0067g03830.t01 | Wine grape | plastid | 32.03 | 22.27 |
| Bra002968.1-P | Field mustard | plastid | 26.14 | 20.73 |
| Os02t0458100-01 | Rice | plastid | 26.47 | 20.72 |
| VIT_12s0059g02710.t01 | Wine grape | plastid | 34.64 | 20.42 |
| CDY70719 | Canola | cytosol | 23.2 | 20.4 |
| VIT_13s0067g00130.t01 | Wine grape | plastid | 34.31 | 20.15 |
| Solyc01g101190.2.1 | Tomato | cytosol | 35.62 | 19.75 |
| VIT_00s0724g00010.t01 | Wine grape | cytosol | 27.45 | 19.67 |
| PGSC0003DMT400062798 | Potato | cytosol, mitochondrion | 8.5 | 19.4 |
| CDX95273 | Canola | plastid | 25.82 | 18.85 |
| VIT_13s0084g00010.t01 | Wine grape | cytosol | 33.01 | 18.33 |
| VIT_13s0067g00370.t01 | Wine grape | plastid | 35.29 | 18.31 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 24.51 | 18.25 |
| KRG93110 | Soybean | mitochondrion | 17.65 | 18.24 |
| VIT_13s0067g03700.t01 | Wine grape | cytosol | 32.35 | 17.49 |
| AT3G14490.1 | Thale cress | plastid | 33.99 | 17.3 |
| Bra021560.1-P | Field mustard | plastid | 33.99 | 17.28 |
| CDY39119 | Canola | plastid | 33.99 | 17.28 |
| Bra001557.1-P | Field mustard | plastid | 33.66 | 17.05 |
| AT3G29410.1 | Thale cress | plastid | 33.33 | 16.92 |
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 31.05 | 16.78 |
| AT1G33750.1 | Thale cress | mitochondrion, plastid | 33.01 | 16.75 |
| Bra021564.1-P | Field mustard | plastid | 33.01 | 16.75 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 26.8 | 16.73 |
| CDX75776 | Canola | plastid | 32.03 | 16.7 |
| VIT_13s0019g00060.t01 | Wine grape | plastid | 32.35 | 16.67 |
| CDY32356 | Canola | plastid | 33.33 | 16.45 |
| Bra021563.1-P | Field mustard | cytoskeleton, cytosol, plastid | 29.74 | 16.28 |
| VIT_12s0134g00030.t01 | Wine grape | mitochondrion | 30.72 | 16.23 |
| VIT_13s0067g03790.t01 | Wine grape | plastid | 31.37 | 16.19 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 26.47 | 15.94 |
| CDY39124 | Canola | cytoskeleton, cytosol, plastid | 29.09 | 15.92 |
| Bra035927.1-P | Field mustard | mitochondrion, plastid | 29.41 | 15.85 |
| VIT_13s0067g00300.t01 | Wine grape | cytosol | 8.17 | 15.82 |
| CDY14933 | Canola | cytosol | 25.16 | 15.78 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 24.84 | 15.77 |
| VIT_12s0134g00020.t01 | Wine grape | plastid | 30.72 | 15.64 |
| AT3G14520.1 | Thale cress | plastid | 30.72 | 15.54 |
| CDY27296 | Canola | cytosol | 9.8 | 15.38 |
| Bra021566.1-P | Field mustard | plastid | 25.49 | 15.35 |
| CDX82475 | Canola | plastid | 29.09 | 15.32 |
| AT3G14540.1 | Thale cress | plastid | 30.07 | 15.28 |
| AT1G48820.1 | Thale cress | mitochondrion, plastid | 27.78 | 15.15 |
| CDX87217 | Canola | plastid | 29.74 | 15.14 |
| Bra001555.1-P | Field mustard | plastid | 30.07 | 15.13 |
| AT3G29110.1 | Thale cress | plastid | 29.41 | 15.13 |
| Bra012955.1-P | Field mustard | plastid | 29.41 | 15.03 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 24.84 | 14.99 |
| Bra027931.1-P | Field mustard | plastid | 29.41 | 14.97 |
| AT3G32030.1 | Thale cress | plastid | 29.41 | 14.9 |
| AT1G31950.3 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole | 29.41 | 14.8 |
| CDX98470 | Canola | plastid | 28.1 | 14.73 |
| AT5G44630.1 | Thale cress | cytosol | 26.8 | 14.72 |
| VIT_00s2271g00010.t01 | Wine grape | cytosol | 18.95 | 14.68 |
| CDY54565 | Canola | plastid | 27.45 | 14.61 |
| Bra002714.1-P | Field mustard | plastid | 28.1 | 14.6 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 24.18 | 14.6 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 24.18 | 14.6 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 27.45 | 14.56 |
| CDX74453 | Canola | cytosol | 25.16 | 14.5 |
| CDY68962 | Canola | cytosol | 23.86 | 14.48 |
| CDY63249 | Canola | cytosol | 26.14 | 14.39 |
| AT1G48800.1 | Thale cress | mitochondrion, plastid | 28.1 | 14.26 |
| CDY49723 | Canola | plastid | 27.78 | 14.26 |
| CDX75775 | Canola | plastid | 22.55 | 14.26 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 22.88 | 14.23 |
| AT4G15870.1 | Thale cress | plastid | 27.78 | 14.21 |
| AT4G20210.1 | Thale cress | plastid | 27.78 | 14.17 |
| CDX82478 | Canola | cytosol | 24.84 | 14.15 |
| Bra002165.1-P | Field mustard | cytosol | 25.49 | 14.03 |
| CDY09324 | Canola | plastid | 27.45 | 14.02 |
| CDX98661 | Canola | cytosol | 25.49 | 14.0 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 22.22 | 13.96 |
| CDX98659 | Canola | plastid | 28.1 | 13.92 |
| AT1G70080.1 | Thale cress | mitochondrion | 27.78 | 13.91 |
| AT4G20200.1 | Thale cress | plastid | 27.45 | 13.91 |
| AT4G13280.2 | Thale cress | cytosol | 25.16 | 13.9 |
| Bra028251.1-P | Field mustard | cytosol | 25.16 | 13.82 |
| Bra020953.1-P | Field mustard | plastid | 27.45 | 13.77 |
| AT4G13300.1 | Thale cress | cytosol | 24.84 | 13.72 |
| Bra039519.1-P | Field mustard | cytosol | 24.84 | 13.64 |
| CDY41707 | Canola | plastid | 25.82 | 13.57 |
| CDY13053 | Canola | extracellular | 24.51 | 13.56 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 22.88 | 13.54 |
| AT1G66020.1 | Thale cress | plastid | 26.14 | 13.38 |
| AT4G20230.2 | Thale cress | plastid | 26.8 | 13.25 |
| CDY02143 | Canola | plastid | 23.86 | 13.2 |
| CDX76457 | Canola | plastid | 25.82 | 13.14 |
| CDX76471 | Canola | plastid | 25.82 | 13.1 |
| CDY42473 | Canola | cytosol | 23.86 | 12.99 |
| CDY69236 | Canola | cytosol | 20.26 | 12.81 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 18.63 | 12.67 |
| AT3G29190.1 | Thale cress | plastid | 24.84 | 12.65 |
| AT2G23230.2 | Thale cress | plastid | 24.84 | 12.44 |
| Bra012513.1-P | Field mustard | cytosol | 19.28 | 12.42 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 25.49 | 12.09 |
| VIT_13s0067g03740.t01 | Wine grape | cytosol | 15.36 | 11.14 |
| CDY06577 | Canola | cytosol | 10.46 | 9.76 |
| Bra020921.1-P | Field mustard | cytosol | 11.44 | 8.64 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 11.11 | 8.37 |
| CDY23121 | Canola | cytosol | 10.13 | 8.16 |
| VIT_13s0067g00090.t01 | Wine grape | cytosol | 8.5 | 7.43 |
| VIT_13s0067g03770.t01 | Wine grape | cytosol | 7.84 | 6.92 |
| CDY14934 | Canola | cytosol | 0.33 | 6.25 |
| AT5G48110.1 | Thale cress | plastid | 5.56 | 5.01 |
| CDY71184 | Canola | cytosol | 4.58 | 4.19 |
| VIT_12s0134g00040.t01 | Wine grape | mitochondrion | 1.96 | 2.68 |
| PGSC0003DMT400070310 | Potato | cytosol | 1.96 | 1.93 |
| PGSC0003DMT400079785 | Potato | cytosol | 1.96 | 1.93 |
| CDX75774 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 2.29 | 1.84 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 1.63 | 1.58 |
| VIT_12s0134g00140.t01 | Wine grape | cytosol | 0.65 | 0.68 |
| VIT_12s0134g00090.t01 | Wine grape | cytosol | 0.65 | 0.68 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 0.33 | 0.53 |
| CDX95274 | Canola | cytosol | 0.0 | 0.0 |
| GSMUA_Achr6P24330_001 | Banana | cytosol | 0.0 | 0.0 |
| GSMUA_Achr6P24340_001 | Banana | cytosol | 0.0 | 0.0 |
| VIT_13s0067g00320.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:50.4.2 | ProteinID:CCB56056 | ProteinID:CCB56056.1 | UniProt:F6HN01 |
| EMBL:FN595996 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf |
| PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF25 | SUPFAM:SSF48239 | SUPFAM:SSF48576 |
| InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0002108E20 | ArrayExpress:VIT_18s0001g04510 |
| EnsemblPlantsGene:VIT_18s0001g04510 | EnsemblPlants:VIT_18s0001g04510.t01 | : | : | : | : |
Description
No Description!
Coordinates
chr18_random:+:3878994..3880248
Molecular Weight (calculated)
35111.5 Da
IEP (calculated)
8.031
GRAVY (calculated)
-0.198
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MELAKLFLSY LPIHHSRYST VLSLFQGINM STQVSASSLA QIPKPKNRPV ANYHPNIWGD QFISYIPEDK VTRACKEEQF VDLKKEVKRK LTAAAVANPS
101: QLLNFIDAVQ RLGVAYHFEQ EIEEALQHIC NSFHDCNDMD GDLYNIALGF RLLRQQGYSI SCGIFNKFMD ERGRFKEALI SDVRGMLCLY EAAHLRVHGE
201: DIIAKALAFT TTHLKAMVES LGYHLAEQVA HALNRPIRKG LERLEARWYI SVYQDEAFHD KTLLELAKLD FNLVQSLHKE ELSKSCKVVE RIRLCYKVTF
301: CTRQIG
101: QLLNFIDAVQ RLGVAYHFEQ EIEEALQHIC NSFHDCNDMD GDLYNIALGF RLLRQQGYSI SCGIFNKFMD ERGRFKEALI SDVRGMLCLY EAAHLRVHGE
201: DIIAKALAFT TTHLKAMVES LGYHLAEQVA HALNRPIRKG LERLEARWYI SVYQDEAFHD KTLLELAKLD FNLVQSLHKE ELSKSCKVVE RIRLCYKVTF
301: CTRQIG
001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE WLPVVPDEIP IPDSMKFIYN VTVEFYDKLD EELEKEGRSG CGFHLKKSLQ KTANGYMQEA KWLKKDYIAT FDEYKENAIL
401: SSGYYALIAM TFVRMTDVAK LDAFEWLSSH PKIRVASEII SRFTDDISSY EFEHKREHVA TGIDCYMQQF GVSKERAVEV MGNIVSDAWK DLNQELMRPH
501: VFPFPLLMRV LNLSRVIDVF YRYQDAYTNP KLLKEHIVSL LIETIPI
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE WLPVVPDEIP IPDSMKFIYN VTVEFYDKLD EELEKEGRSG CGFHLKKSLQ KTANGYMQEA KWLKKDYIAT FDEYKENAIL
401: SSGYYALIAM TFVRMTDVAK LDAFEWLSSH PKIRVASEII SRFTDDISSY EFEHKREHVA TGIDCYMQQF GVSKERAVEV MGNIVSDAWK DLNQELMRPH
501: VFPFPLLMRV LNLSRVIDVF YRYQDAYTNP KLLKEHIVSL LIETIPI
Arabidopsis Description
TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.