Factsheet for VIT_13s0067g00370.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0084g00010.t01	Wine grape	cytosol	87.97	94.19
VIT_00s2271g00010.t01	Wine grape	cytosol	61.69	92.15
VIT_13s0067g00090.t01	Wine grape	cytosol	54.41	91.71
VIT_00s0724g00010.t01	Wine grape	cytosol	64.92	89.7
VIT_13s0067g00130.t01	Wine grape	plastid	76.95	87.14
VIT_13s0067g00300.t01	Wine grape	cytosol	23.05	86.08
VIT_13s0067g00320.t01	Wine grape	cytosol	16.44	82.2
VIT_13s0067g03770.t01	Wine grape	cytosol	45.59	77.52
VIT_13s0067g03700.t01	Wine grape	cytosol	70.0	72.97
VIT_13s0067g03740.t01	Wine grape	cytosol	48.31	67.54
VIT_13s0019g00060.t01	Wine grape	plastid	66.27	65.82
VIT_13s0067g03790.t01	Wine grape	plastid	65.08	64.76
VIT_13s0067g03830.t01	Wine grape	plastid	46.61	62.5
PGSC0003DMT400089009	Potato	cytosol	15.08	55.28
PGSC0003DMT400055897	Potato	cytosol	11.19	54.55
GSMUA_Achr4P07690_001	Banana	cytosol	14.92	51.46
VIT_12s0134g00040.t01	Wine grape	mitochondrion	19.49	51.34
CDY66920	Canola	cytosol	27.97	49.85
VIT_12s0134g00020.t01	Wine grape	plastid	50.34	49.42
Solyc01g105960.2.1	Tomato	cytosol	29.49	49.15
VIT_00s0392g00030.t01	Wine grape	cytosol	26.1	48.58
VIT_12s0134g00030.t01	Wine grape	mitochondrion	47.12	48.01
CDY53648	Canola	cytosol	20.17	46.48
CDY53129	Canola	cytosol	20.17	46.48
Bra025163.1-P	Field mustard	cytosol	43.73	46.07
VIT_00s0361g00060.t01	Wine grape	cytosol	43.73	45.58
AT4G16740.1	Thale cress	mitochondrion	42.71	44.6
Bra021082.1-P	Field mustard	cytosol	41.19	44.51
CDY54750	Canola	cytosol	30.17	44.39
CDX76827	Canola	plastid	42.03	44.36
AT3G25810.1	Thale cress	plastid	44.92	44.31
CDY68676	Canola	cytosol	28.14	44.15
CDY13587	Canola	plastid	44.07	44.14
CDX83558	Canola	plastid	44.07	44.14
AT3G25830.1	Thale cress	plastid	44.75	44.0
AT3G25820.1	Thale cress	plastid	44.75	44.0
AT4G16730.1	Thale cress	cytosol	40.17	43.97
VIT_00s0392g00060.t01	Wine grape	cytosol	31.19	43.91
CDY62515	Canola	cytosol	29.83	43.89
VIT_12s0134g00140.t01	Wine grape	cytosol	21.36	43.15
CDX83560	Canola	plastid	41.19	43.01
VIT_00s0372g00060.t01	Wine grape	cytosol	13.56	42.78
CDX90785	Canola	plastid	42.71	42.5
AT2G24210.1	Thale cress	plastid	42.54	42.47
Bra038504.1-P	Field mustard	plastid	38.47	42.27
VIT_12s0134g00090.t01	Wine grape	cytosol	21.02	42.18
VIT_00s0271g00030.t01	Wine grape	cytosol	34.41	42.12
Bra000727.1-P	Field mustard	plastid	36.27	42.04
CDY13589	Canola	plastid	39.49	41.83
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	17.63	41.43
VIT_12s0059g02710.t01	Wine grape	plastid	36.44	41.43
VIT_18s0001g04200.t01	Wine grape	cytosol	8.31	41.18
Bra000568.1-P	Field mustard	plastid	39.32	38.99
CDX83208	Canola	plastid	39.32	38.99
VIT_00s0271g00010.t01	Wine grape	cytosol	32.37	38.82
CDY21487	Canola	plastid	38.98	38.66
VIT_00s0572g00010.t01	Wine grape	cytosol	29.32	38.44
VIT_00s0847g00020.t01	Wine grape	cytosol	26.78	38.44
VIT_00s0372g00020.t01	Wine grape	cytosol	26.44	38.42
VIT_00s0266g00020.t01	Wine grape	cytosol	31.69	38.4
VIT_00s0266g00010.t01	Wine grape	cytosol	32.71	38.07
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	43.9	37.92
VIT_00s0572g00020.t01	Wine grape	cytosol	32.54	37.87
VIT_00s0372g00040.t01	Wine grape	cytosol	32.54	37.87
VIT_12s0059g02720.t01	Wine grape	plastid	24.75	37.63
VIT_08s0007g06860.t01	Wine grape	plastid	18.14	37.28
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	35.93	36.74
VIT_00s0266g00070.t01	Wine grape	cytosol	31.53	35.98
VIT_00s0385g00020.t01	Wine grape	cytosol	30.85	35.83
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	29.32	35.31
VIT_18s0001g04510.t01	Wine grape	plastid	18.31	35.29
KRH22502	Soybean	cytosol	10.17	34.29
CDY68788	Canola	endoplasmic reticulum, golgi	22.03	30.95
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	16.1	30.65
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	32.71	29.92
CDY12909	Canola	cytosol	11.02	28.02
Bra025164.1-P	Field mustard	cytosol	43.9	24.39
Bra027079.1-P	Field mustard	plastid	13.39	23.72
CDY12910	Canola	plastid	5.76	22.82
CDY61957	Canola	plastid	14.58	22.75
VIT_18s0001g05430.t01	Wine grape	cytosol	18.47	22.61

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:100232956	wikigene:100232956	EntrezGene:100254181	wikigene:100254181
EntrezGene:100266404	wikigene:100266404	MapMan:9.1.4.2	ProteinID:AAS79351	ProteinID:AAS79351.1	ProteinID:AAS79352
ProteinID:AAS79352.1	ProteinID:ADR74206	ProteinID:ADR74206.1	EMBL:AM432644	EMBL:AM462461	EMBL:AM485900
EMBL:AY572986	EMBL:AY572987	ProteinID:CAN62729	ProteinID:CAN62729.1	ProteinID:CAN64328	ProteinID:CAN64328.1
ProteinID:CAN74705	ProteinID:CAN74705.1	ProteinID:CCB62574	ProteinID:CCB62574.1	UniProt:F6I6K6	EMBL:FN596756
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010333	GO:GO:0016114	GO:GO:0016829
GO:GO:0046872	EMBL:HM807387	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	EntrezGene:LOC100232956
wikigene:LOC100232956	EntrezGene:LOC100254181	wikigene:LOC100254181	EntrezGene:LOC100266404	wikigene:LOC100266404	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576	TIGR:TC51692
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000210AB72
ArrayExpress:VIT_13s0067g00370	EnsemblPlantsGene:VIT_13s0067g00370	EnsemblPlants:VIT_13s0067g00370.t01	unigene:Vvi.19246	RefSeq:XP_002267461	RefSeq:XP_002267461.2
RefSeq:XP_003634884	RefSeq:XP_003634884.1	RefSeq:XP_019073160.1	:	:	:

Description

No Description!

Coordinates

chr13_random:-:231694..234243

Molecular Weight (calculated)

68871.5 Da

IEP (calculated)

5.820

GRAVY (calculated)

-0.373

Length

590 amino acids

Sequence
(BLAST)

001: MALSMLASIP NLITHTRLPI IRRSSSCKAS PPGNQSMIGN STCEEIIVRR TANYHPPIWE YDYVQSLRSD YVGETYTIKL DKLKRYVKPM LGKVKKPLDQ
101: LELIDVLQRL GLYYHFKDEI KRILDIIYNQ YNQHEEWKKD DLYATALEFR LLRQHGYDVP QDVFSRFKDE TGSFKACLCE DMKGMLCLYE ASYLCVQGES
201: TMEQARDFAH RHLGKGLEQN TDQNLAIEVN HALELPLHWR LPRLEARWFI DVYEKRQDMN PILLEFAKLD FNMVQATHQE DLRHMSSWWS STRLGEKLNF
301: ARDRLMENFL WTVGVIFEPQ YGYCRRMSTK LGSFITIIDD VYDVHGTMDE LELFTDVVDR WDINAMDPLP EYMKLCFLAL YNSTNEMAYD ALKEHGLHIV
401: SYLRKAWSDL CKSYLLEAKW YYSGYTPTLQ EYISNSWISV SGPVLLVHAY FFVANPITKE ALQSLERYHN IIRWSSMILR LSDDLGTSLD ELKRGDVPKS
501: IQCYMYETGA SEEEARKHIS YLIGETWKKL NEDGAVESPF PETFIRIATN LARMAQFMYQ HGDGHGIEYG KTEDRVLSLL VEPIPSLSSE

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.