Factsheet for Bra027079.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12909	Canola	cytosol	61.26	87.93
CDY12910	Canola	plastid	18.32	40.94
PGSC0003DMT400055897	Potato	cytosol	10.81	29.75
VIT_13s0067g00300.t01	Wine grape	cytosol	10.51	22.15
PGSC0003DMT400089009	Potato	cytosol	10.21	21.12
Bra027609.1-P	Field mustard	cytosol	15.92	18.4
VIT_00s0724g00010.t01	Wine grape	cytosol	22.52	17.56
VIT_13s0067g03740.t01	Wine grape	cytosol	21.92	17.3
VIT_00s2271g00010.t01	Wine grape	cytosol	20.12	16.96
VIT_13s0067g03830.t01	Wine grape	plastid	21.32	16.14
VIT_13s0067g00130.t01	Wine grape	plastid	24.62	15.74
VIT_13s0067g03770.t01	Wine grape	cytosol	16.22	15.56
Solyc02g079840.1.1	Tomato	cytosol	24.62	15.24
VIT_13s0067g00090.t01	Wine grape	cytosol	15.92	15.14
Bra038504.1-P	Field mustard	plastid	23.72	14.71
VIT_13s0067g03790.t01	Wine grape	plastid	26.13	14.67
VIT_13s0019g00060.t01	Wine grape	plastid	26.13	14.65
VIT_13s0084g00010.t01	Wine grape	cytosol	24.02	14.52
Bra021082.1-P	Field mustard	cytosol	23.42	14.29
VIT_13s0067g03700.t01	Wine grape	cytosol	23.42	13.78
Bra012515.1-P	Field mustard	extracellular	10.21	13.77
Bra025163.1-P	Field mustard	cytosol	23.12	13.75
VIT_13s0067g00370.t01	Wine grape	plastid	23.72	13.39
Bra020921.1-P	Field mustard	cytosol	15.62	12.84
Bra000568.1-P	Field mustard	plastid	22.82	12.77
Bra002165.1-P	Field mustard	cytosol	19.82	11.87
Bra021566.1-P	Field mustard	plastid	18.02	11.81
Bra028251.1-P	Field mustard	cytosol	19.52	11.67
Bra000727.1-P	Field mustard	plastid	17.72	11.59
Bra012513.1-P	Field mustard	cytosol	16.22	11.37
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	18.92	11.27
GSMUA_Achr4P07690_001	Banana	cytosol	5.71	11.11
Bra001555.1-P	Field mustard	plastid	20.12	11.02
Bra039519.1-P	Field mustard	cytosol	18.32	10.95
Bra002968.1-P	Field mustard	plastid	12.61	10.88
Bra012955.1-P	Field mustard	plastid	19.52	10.85
Bra027931.1-P	Field mustard	plastid	19.52	10.82
Bra002714.1-P	Field mustard	plastid	18.92	10.7
Bra020953.1-P	Field mustard	plastid	19.22	10.49
KRH22502	Soybean	cytosol	5.41	10.29
Bra035927.1-P	Field mustard	mitochondrion, plastid	17.42	10.21
Bra021564.1-P	Field mustard	plastid	18.32	10.12
Bra001557.1-P	Field mustard	plastid	18.32	10.1
Bra021560.1-P	Field mustard	plastid	18.02	9.97
Bra025164.1-P	Field mustard	cytosol	22.52	7.06
VIT_13s0067g00320.t01	Wine grape	cytosol	2.4	6.78

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra027079	EnsemblPlants:Bra027079.1	EnsemblPlants:Bra027079.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4EE68
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00025425E1	SEG:seg

Description

AT1G61680 (E=2e-039) TPS14, ATTPS14 | TPS14 (TERPENE SYNTHASE 14); S-linalool synthase

Coordinates

chrA09:+:8261973..8263911

Molecular Weight (calculated)

37807.4 Da

IEP (calculated)

5.306

GRAVY (calculated)

-0.206

Length

333 amino acids

Sequence
(BLAST)

001: MIYRSCFAST NPNSLPKFLV SKFHGTVASS SPANTTKRSS PSNFNLPVSN YLRRFDHKIS IKHPRQEEWI QNDLQNDVKG LIELYEASEL GVEGEEILDS
101: LRECTFTRLN ELCSGRDSHE EREIMNSLAQ PRHKTLRRLT SNKFISIIKI GGEEDNEWLQ SLLRVAECDS IMLKSLIREE IPQAFKAEEG KKLATEMAYM
201: VPGILQEPCF SEQRLDLTKP ISLVYIIDDI FDVYGELDEL TIFTQVVESG LICSERSWSK QNGLIRVTYQ ILRSNGFVSS GVHLVMLHVY YLLGEEITTG
301: KVELIESIPK IVSSAATILR LWDDLGSAKV ILN

Best Arabidopsis Sequence Match ( AT1G61680.2 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE NKKGGFKDVV KNDVKGLTEL FEASELRVEG EETLDGAREF TYSRLNELCS
201: GRESHQKQEI MKSLAQPRHK TVRGLTSKRF TSMIKIAGQE DPEWLQSLLR VAEIDSIRLK SLTQGEMSQT FKWWTELGLE KDVEKARSQP LKWHTWSMKI
301: LQDPTLTEQR LDLTKPISLV YVIDDIFDVY GELEELTIFT RVVERWDHKG LKTLPKYMRV CFEALDMITT EISMKIYKSH GWNPTYALRQ SWASLCKAFL
401: VEAKWFNSGY LPTTEEYMKN GVVSSGVHLV MLHAYILLGE ELTKEKVELI ESNPGIVSSA ATILRLWDDL GSAKDENQDG TDGSYVECYL NEYKGSTVDE
501: ARTHVAQKIS RAWKRLNREC LNPCPFSRSF SKACLNIART VPLMYSYDDD QRLPDEYLKS LM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.