Factsheet for Bra001555.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82478	Canola	cytosol	86.35	97.77
CDX82477	Canola	plastid	48.19	97.67
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	52.47	83.73
CDX75775	Canola	plastid	61.35	77.07
AT3G32030.1	Thale cress	plastid	67.76	68.21
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	55.76	60.64
Bra001557.1-P	Field mustard	plastid	59.87	60.26
Bra021564.1-P	Field mustard	plastid	59.38	59.87
Bra021560.1-P	Field mustard	plastid	59.05	59.63
Bra021566.1-P	Field mustard	plastid	49.18	58.86
Bra012955.1-P	Field mustard	plastid	57.24	58.1
Bra035927.1-P	Field mustard	mitochondrion, plastid	54.11	57.92
VIT_18s0001g04200.t01	Wine grape	cytosol	8.55	43.7
Bra027609.1-P	Field mustard	cytosol	20.39	43.06
Bra012515.1-P	Field mustard	extracellular	16.45	40.49
PGSC0003DMT400050941	Potato	cytosol	16.61	40.4
PGSC0003DMT400075074	Potato	cytosol	13.82	40.38
Bra020921.1-P	Field mustard	cytosol	26.48	39.75
Bra012513.1-P	Field mustard	cytosol	30.92	39.58
Bra002165.1-P	Field mustard	cytosol	35.2	38.49
Bra027931.1-P	Field mustard	plastid	37.66	38.1
Bra028251.1-P	Field mustard	cytosol	34.7	37.88
Bra002714.1-P	Field mustard	plastid	36.35	37.52
PGSC0003DMT400070310	Potato	cytosol	19.08	37.3
Bra002968.1-P	Field mustard	plastid	23.36	36.79
PGSC0003DMT400079785	Potato	cytosol	18.75	36.66
Bra039519.1-P	Field mustard	cytosol	33.55	36.62
Solyc01g101190.2.1	Tomato	cytosol	32.24	35.51
Bra020953.1-P	Field mustard	plastid	35.53	35.41
PGSC0003DMT400047124	Potato	cytosol	18.09	35.37
Solyc01g101220.1.1	Tomato	cytosol	9.05	32.74
VIT_18s0001g04510.t01	Wine grape	plastid	15.13	30.07
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.97	29.35
Os02t0458100-01	Rice	plastid	18.42	28.64
KRG93110	Soybean	mitochondrion	11.84	24.32
Bra038504.1-P	Field mustard	plastid	21.38	24.21
Bra000727.1-P	Field mustard	plastid	20.23	24.16
GSMUA_Achr6P24330_001	Banana	cytosol	5.59	24.11
Bra025163.1-P	Field mustard	cytosol	21.71	23.57
GSMUA_Achr6P24340_001	Banana	cytosol	5.76	23.49
Bra000568.1-P	Field mustard	plastid	22.53	23.03
Bra021082.1-P	Field mustard	cytosol	20.39	22.71
VIT_18s0001g05430.t01	Wine grape	cytosol	16.45	20.75
Bra027079.1-P	Field mustard	plastid	11.02	20.12
Bra025164.1-P	Field mustard	cytosol	23.03	13.18

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra001555	EnsemblPlants:Bra001555.1	EnsemblPlants:Bra001555.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010333	GO:GO:0016114	GO:GO:0016829
GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4CBH5	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002540973	SEG:seg

Description

AT3G32030 (E=5e-235) | terpene synthase/cyclase family protein

Coordinates

chrA03:-:17039487..17043876

Molecular Weight (calculated)

70572.0 Da

IEP (calculated)

5.957

GRAVY (calculated)

-0.296

Length

608 amino acids

Sequence
(BLAST)

001: MEASRMSFGL SSPHHACKVP ICLKTNLSLV PQCLLQKKSL SRRQKKHDLF CVRANKSASD DDLESSRPLT QFSPSFWGDY FLSFSVDQSE SDGLAKEIES
101: VMKPNVRDRL MSSHSGDKEK IRIIHLLICL GISHYFDKEI EEILDQGFRK LNDIIAKEDD LETISIMFEV FRLYGHKMSC DNFERFKGED GRFKESLAGD
201: VRGMLQLYQA AHLGTPSEDI LEEAMSFTRN QLECFASQEM STLSPHLSTH IRNALYRPRC HNMEIFAARE YVSFYNHEEG HDEVLLRFAK LSFNYCRLLY
301: IQEIKTLTKW WNNLDVPSKL PYVRDRIVET HFPALGPYFE PRYSLGRIIM TKIIIVVVIL DDTCDAYGTF PEVKSLIDFL QRWDLGAIEE LQGYLRIVAR
401: TLLETLGEIE REMKPRGRSA SVQHTIDEIK SIGRAYLAIS NWARAGHVPT FEEYMEVAMV TAGMDDFASY SFIAMEDCDE KPLYEWFNSK PRIFQALCVM
501: YRLKNDIATY ELEMKRGEVA NGVNCYMKQH DVTKEETVEE FNKIYRENYK IMMEEFLTTK CVPRQILMRC LNISRTFDVI CKEGDGYTEP LGNLKDMITS
601: FFLHPILL

Best Arabidopsis Sequence Match ( AT3G32030.1 )
(BLAST)

001: MAVARTVFGL GTLSYLHQAP LFLKTSQSLF PRPSLSLKPM KHDFVCVKAT TKSSTSDDLE SGRPSILFSP SIWGDYFLSV SVDDSEFDDI AREIESVMKP
101: YVRDRLISSH NSNKDKIRLI HLLISLGISY YFESEIEMIL NKAFEELDMI IAEEDDLETI SIMFEVFRLY QHKMSCDSFV RFKGEDGRLK ESLVGDVRGM
201: LQLYQAAHLG TPSDQYIMEE AKSFTRNHLE SLVESTTIPP HFSSHIRDAL YIDRYHNMEI LVARKYISFY EQEEGHDLTL LKFGKLSFNY CRLHYIQELK
301: TLTKWWKDQD IPSNLPCVRD RIVETYFPTL GLYFEPRFSL GRIIIAKMTI IVVALNDVCD SYATYPEAKS LIDSLQRWDI EAIDELPNYS RIVLRLILET
401: IGEIEREMKP RGRSASVQHT IDETKSLGRA YLALSKWASE GYMPTFDEYM EVGEVTGGMD DFALYSFIAM EDCDEKPLYE WFDSKPKILQ ALSVLYRINN
501: DIVTYEREMS KGEVVNGVNS YMNQHGVTKE EAVEELRKMA RDNYKIVMEE LLTITDVPRP VLVRCLNLAR LFDVFCKHGN DEFTYPHGNL KDLITSIFIH
601: PIPV

Arabidopsis Description

TPS30Terpenoid synthase 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH31]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.