Factsheet for AT3G32030.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82478	Canola	cytosol	61.92	69.65
Bra001555.1-P	Field mustard	plastid	68.21	67.76
CDX82477	Canola	plastid	32.45	65.33
AT3G14490.1	Thale cress	plastid	60.43	60.73
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	36.92	58.53
AT3G29410.1	Thale cress	plastid	57.12	57.21
AT1G33750.1	Thale cress	mitochondrion, plastid	56.79	56.88
AT3G14540.1	Thale cress	plastid	56.13	56.31
AT3G14520.1	Thale cress	plastid	55.79	55.7
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	54.8	54.44
CDX75775	Canola	plastid	42.55	53.1
VIT_18s0001g04200.t01	Wine grape	cytosol	8.28	42.02
AT5G44630.1	Thale cress	cytosol	37.25	40.4
AT4G13300.1	Thale cress	cytosol	36.59	39.89
AT3G29110.1	Thale cress	plastid	39.07	39.66
PGSC0003DMT400050941	Potato	cytosol	16.39	39.6
AT5G48110.1	Thale cress	plastid	21.85	38.94
AT4G20200.1	Thale cress	plastid	38.41	38.41
AT4G13280.2	Thale cress	cytosol	34.93	38.09
AT4G20210.1	Thale cress	plastid	37.42	37.67
AT1G66020.1	Thale cress	plastid	36.92	37.29
AT1G70080.1	Thale cress	mitochondrion	37.09	36.66
AT1G48820.1	Thale cress	mitochondrion, plastid	33.94	36.54
AT3G29190.1	Thale cress	plastid	36.09	36.27
PGSC0003DMT400075074	Potato	cytosol	12.42	36.06
PGSC0003DMT400079785	Potato	cytosol	18.54	36.01
AT4G15870.1	Thale cress	plastid	35.6	35.95
AT4G20230.2	Thale cress	plastid	36.76	35.86
PGSC0003DMT400070310	Potato	cytosol	18.38	35.69
AT1G48800.1	Thale cress	mitochondrion, plastid	35.6	35.66
Solyc01g101190.2.1	Tomato	cytosol	32.12	35.14
PGSC0003DMT400047124	Potato	cytosol	17.55	34.08
AT2G23230.2	Thale cress	plastid	32.95	32.57
VIT_18s0001g04510.t01	Wine grape	plastid	14.9	29.41
Solyc01g101220.1.1	Tomato	cytosol	7.95	28.57
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.57	28.39
Os02t0458100-01	Rice	plastid	17.88	27.62
AT4G16730.1	Thale cress	cytosol	23.51	26.35
AT3G25820.1	Thale cress	plastid	24.17	24.33
AT3G25830.1	Thale cress	plastid	24.17	24.33
AT3G25810.1	Thale cress	plastid	24.01	24.25
AT2G24210.1	Thale cress	plastid	23.68	24.2
AT4G16740.1	Thale cress	mitochondrion	22.02	23.54
GSMUA_Achr6P24340_001	Banana	cytosol	5.79	23.49
GSMUA_Achr6P24330_001	Banana	cytosol	5.46	23.4
KRG93110	Soybean	mitochondrion	10.76	21.96
VIT_18s0001g05430.t01	Wine grape	cytosol	16.56	20.75
AT1G61680.1	Thale cress	plastid	19.04	20.21

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:822955	MapMan:9.1.4.2	ProteinID:AEE77679.1	ArrayExpress:AT3G32030
EnsemblPlantsGene:AT3G32030	RefSeq:AT3G32030	TAIR:AT3G32030	RefSeq:AT3G32030-TAIR-G	EnsemblPlants:AT3G32030.1	TAIR:AT3G32030.1
ProteinID:BAB01981.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0010333	GO:GO:0016114	GO:GO:0016829	GO:GO:0046872
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_189746.1	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	UniProt:Q9LH31	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00000487B4	:

Description

TPS30Terpenoid synthase 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH31]

Coordinates

chr3:-:13032306..13035440

Molecular Weight (calculated)

69815.8 Da

IEP (calculated)

5.012

GRAVY (calculated)

-0.211

Length

604 amino acids

Sequence
(BLAST)

001: MAVARTVFGL GTLSYLHQAP LFLKTSQSLF PRPSLSLKPM KHDFVCVKAT TKSSTSDDLE SGRPSILFSP SIWGDYFLSV SVDDSEFDDI AREIESVMKP
101: YVRDRLISSH NSNKDKIRLI HLLISLGISY YFESEIEMIL NKAFEELDMI IAEEDDLETI SIMFEVFRLY QHKMSCDSFV RFKGEDGRLK ESLVGDVRGM
201: LQLYQAAHLG TPSDQYIMEE AKSFTRNHLE SLVESTTIPP HFSSHIRDAL YIDRYHNMEI LVARKYISFY EQEEGHDLTL LKFGKLSFNY CRLHYIQELK
301: TLTKWWKDQD IPSNLPCVRD RIVETYFPTL GLYFEPRFSL GRIIIAKMTI IVVALNDVCD SYATYPEAKS LIDSLQRWDI EAIDELPNYS RIVLRLILET
401: IGEIEREMKP RGRSASVQHT IDETKSLGRA YLALSKWASE GYMPTFDEYM EVGEVTGGMD DFALYSFIAM EDCDEKPLYE WFDSKPKILQ ALSVLYRINN
501: DIVTYEREMS KGEVVNGVNS YMNQHGVTKE EAVEELRKMA RDNYKIVMEE LLTITDVPRP VLVRCLNLAR LFDVFCKHGN DEFTYPHGNL KDLITSIFIH
601: PIPV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.