Factsheet for AT4G20200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G66020.1	Thale cress	plastid	72.68	73.41
AT4G20230.2	Thale cress	plastid	71.52	69.79
Bra012515.1-P	Field mustard	extracellular	28.31	69.23
CDX98659	Canola	plastid	70.03	68.45
AT3G29190.1	Thale cress	plastid	65.56	65.89
CDX76471	Canola	plastid	65.56	65.67
CDY09324	Canola	plastid	64.24	64.77
Bra020953.1-P	Field mustard	plastid	64.24	63.61
CDY09325	Canola	plastid	27.65	61.85
AT4G20210.1	Thale cress	plastid	60.76	61.17
AT3G29110.1	Thale cress	plastid	56.13	56.97
AT1G48800.1	Thale cress	mitochondrion, plastid	55.3	55.39
AT1G48820.1	Thale cress	mitochondrion, plastid	49.67	53.48
AT4G15870.1	Thale cress	plastid	48.84	49.33
AT5G44630.1	Thale cress	cytosol	43.54	47.22
AT4G13280.2	Thale cress	cytosol	42.05	45.85
AT4G13300.1	Thale cress	cytosol	42.05	45.85
AT2G23230.2	Thale cress	plastid	45.86	45.34
AT5G48110.1	Thale cress	plastid	23.84	42.48
AT1G70080.1	Thale cress	mitochondrion	41.89	41.41
PGSC0003DMT400075074	Potato	cytosol	13.24	38.46
AT3G32030.1	Thale cress	plastid	38.41	38.41
AT3G14520.1	Thale cress	plastid	37.91	37.85
AT3G14490.1	Thale cress	plastid	37.25	37.44
PGSC0003DMT400050941	Potato	cytosol	15.4	37.2
AT3G14540.1	Thale cress	plastid	36.92	37.04
VIT_18s0001g04200.t01	Wine grape	cytosol	7.28	36.97
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	37.09	36.84
AT1G33750.1	Thale cress	mitochondrion, plastid	35.76	35.82
AT3G29410.1	Thale cress	plastid	34.11	34.16
Solyc01g101190.2.1	Tomato	cytosol	29.3	32.07
PGSC0003DMT400070310	Potato	cytosol	16.23	31.51
Solyc01g101220.1.1	Tomato	cytosol	8.61	30.95
PGSC0003DMT400047124	Potato	cytosol	15.89	30.87
PGSC0003DMT400079785	Potato	cytosol	15.56	30.23
VIT_18s0001g04510.t01	Wine grape	plastid	13.91	27.45
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.07	27.42
Os02t0458100-01	Rice	plastid	17.72	27.37
AT4G16730.1	Thale cress	cytosol	22.02	24.68
AT2G24210.1	Thale cress	plastid	23.51	24.03
AT3G25820.1	Thale cress	plastid	23.51	23.67
AT3G25830.1	Thale cress	plastid	23.51	23.67
AT4G16740.1	Thale cress	mitochondrion	21.69	23.19
AT3G25810.1	Thale cress	plastid	22.68	22.91
GSMUA_Achr6P24340_001	Banana	cytosol	5.46	22.15
GSMUA_Achr6P24330_001	Banana	cytosol	5.13	21.99
AT1G61680.1	Thale cress	plastid	20.2	21.44
KRG93110	Soybean	mitochondrion	9.93	20.27
VIT_18s0001g05430.t01	Wine grape	cytosol	15.89	19.92

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:827766	MapMan:9.1.4.2	ProteinID:AEE84284.1	ArrayExpress:AT4G20200
EnsemblPlantsGene:AT4G20200	RefSeq:AT4G20200	TAIR:AT4G20200	RefSeq:AT4G20200-TAIR-G	EnsemblPlants:AT4G20200.1	TAIR:AT4G20200.1
Unigene:At.54427	ProteinID:CAA18245.1	ProteinID:CAB79020.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010333	GO:GO:0016114
GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_193753.1
UniProt:O65434	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31045	PANTHER:PTHR31045:SF4	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0000162AD9	:	:	:	:	:

Description

TPS07Putative terpenoid synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:O65434]

Coordinates

chr4:-:10908672..10911151

Molecular Weight (calculated)

70026.4 Da

IEP (calculated)

6.084

GRAVY (calculated)

-0.232

Length

604 amino acids

Sequence
(BLAST)

001: MEATSVFWPK LGSQIFLSSS TNLWPLSKLY GFHLTSFPSK PLKHIRLKAT NTLTFDDQER IRKFKKLPTS EWTHYGHSIS IDVSEMDALR KEIDALKPIL
101: KSTLMSFKGI DSTKKRILMI YLLVSLGLAY HFEEEIYETL KMSFENIDKM MDGEDDLYTV SIIFWVFRRH GYHISYGVFQ RFKGSNGNFK ESLTRDAKGM
201: LSLYEAANLG TTKDFILEEA LSFTSSHLES LAASGTCPPH LSVRIRNALG LSQHWNMEML VPVEFIPFYE QEIEHDEMLL KFAKLSFKLG QLQYLQELKT
301: LTKWYKELDF ATNLPPYFRD RIVEHHFLVQ AVFFSPQLSR ERIMMIQYFT GLALLDDTFD RYASLHEAES LANSLERWAP DQAMDKQPDY LRFVLNFILD
401: TFEEFKRELG PEERSYSVNA TIEEFKAAAK ANIDLEKWAQ ADHIPSFEEY MEVGEVEVTV YASLAGIFMS MGKMATKEAF EWLKSRPKLV QYLSIKGRLM
501: NDLMGYEDDM SRGYVTNAVN CYMKQYGVTK EEAFRELYKI VVAANKTLNE EFLSTTGVPH FLLKATIDLA RMMTVAYNVN EGFTNPQGKI KEYMTSMFVD
601: QIHI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.