Factsheet for AT3G29110.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002714.1-P	Field mustard	plastid	66.05	66.72
CDY49723	Canola	plastid	66.39	66.28
AT4G20230.2	Thale cress	plastid	58.66	56.38
AT4G20200.1	Thale cress	plastid	56.97	56.13
AT1G66020.1	Thale cress	plastid	56.13	55.85
AT4G20210.1	Thale cress	plastid	55.8	55.33
AT3G29190.1	Thale cress	plastid	54.79	54.24
AT1G48820.1	Thale cress	mitochondrion, plastid	50.25	53.3
AT1G48800.1	Thale cress	mitochondrion, plastid	53.28	52.57
AT4G15870.1	Thale cress	plastid	49.75	49.5
AT5G44630.1	Thale cress	cytosol	45.38	48.47
AT4G13300.1	Thale cress	cytosol	40.34	43.32
AT2G23230.2	Thale cress	plastid	44.37	43.21
AT4G13280.2	Thale cress	cytosol	40.17	43.14
VIT_18s0001g04200.t01	Wine grape	cytosol	8.4	42.02
AT5G48110.1	Thale cress	plastid	23.19	40.71
AT1G70080.1	Thale cress	mitochondrion	41.34	40.26
AT3G14490.1	Thale cress	plastid	40.5	40.1
AT3G14520.1	Thale cress	plastid	40.67	40.0
AT3G32030.1	Thale cress	plastid	39.66	39.07
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	39.83	38.98
AT3G14540.1	Thale cress	plastid	39.33	38.87
AT1G33750.1	Thale cress	mitochondrion, plastid	39.16	38.64
PGSC0003DMT400050941	Potato	cytosol	16.13	38.4
AT3G29410.1	Thale cress	plastid	37.14	36.65
PGSC0003DMT400075074	Potato	cytosol	12.27	35.1
Solyc01g101190.2.1	Tomato	cytosol	28.91	31.16
PGSC0003DMT400047124	Potato	cytosol	16.13	30.87
PGSC0003DMT400070310	Potato	cytosol	15.63	29.9
Solyc01g101220.1.1	Tomato	cytosol	8.4	29.76
VIT_18s0001g04510.t01	Wine grape	plastid	15.13	29.41
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	15.29	29.35
PGSC0003DMT400079785	Potato	cytosol	14.79	28.3
Os02t0458100-01	Rice	plastid	17.98	27.37
AT4G16730.1	Thale cress	cytosol	22.69	25.05
KRG93110	Soybean	mitochondrion	12.1	24.32
AT3G25810.1	Thale cress	plastid	24.37	24.25
AT4G16740.1	Thale cress	mitochondrion	22.69	23.89
AT2G24210.1	Thale cress	plastid	23.7	23.86
AT3G25830.1	Thale cress	plastid	22.69	22.5
AT3G25820.1	Thale cress	plastid	22.69	22.5
VIT_18s0001g05430.t01	Wine grape	cytosol	17.48	21.58
GSMUA_Achr6P24340_001	Banana	cytosol	5.38	21.48
GSMUA_Achr6P24330_001	Banana	cytosol	5.04	21.28
AT1G61680.1	Thale cress	plastid	18.82	19.68

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:822559	MapMan:9.1.4.2	UniProt:A0A178VJD2	ProteinID:AEE77537.2
ArrayExpress:AT3G29110	EnsemblPlantsGene:AT3G29110	RefSeq:AT3G29110	TAIR:AT3G29110	RefSeq:AT3G29110-TAIR-G	EnsemblPlants:AT3G29110.1
TAIR:AT3G29110.1	Unigene:At.53559	ProteinID:BAB01988.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010333	GO:GO:0016114
GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_189555.2
ProteinID:OAP05143.1	PFAM:PF01397	PFAM:PF03936	PO:PO:0000084	PO:PO:0009005	PANTHER:PTHR31045
PANTHER:PTHR31045:SF4	UniProt:Q9LVP7	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00000A5FEA	:	:

Description

TPS16Putative terpenoid synthase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVP7]

Coordinates

chr3:-:11082152..11086003

Molecular Weight (calculated)

68545.0 Da

IEP (calculated)

5.126

GRAVY (calculated)

-0.292

Length

595 amino acids

Sequence
(BLAST)

001: METITVFGPK HGSPLSLPSR TNMCWEMKPS RFPLTSVRGK PAKQVGLKVS ASCDRPISKL PPSKWTNYFH SVLVDVSEMD VLEREIEALK PNVREMLMSS
101: KGYDSVKKRS LMIYLLVSLG LAYHFEEEIE KSLKDGFEKI DEIIAGEDDL YTISTIFWVF RTYGYNMSSD VFRRFKEENG KFKESLIEDA RGMLSLYEAA
201: HLGTTTDYIL DEALDFASNN LVSLAEDGMC PSHLSTHIRN ALSISQHWNM EIIVAVQYIR FYEQEVGHDE MLLKFAKLNF NLVQRLYLQE VKILTKWYKD
301: QDIHSKLPPY YRPVVTEMHF FSTATFFEPQ FSHARILQTK LFMAELLVDD TCDRYATFSE VESLINSLQR WAPDDAMDTH PDYLKVVFKF ILNAFEECEK
401: ELRPQGRSYS LEQTKEEYKR FAKSNLDLAK LAQAGNVPSF EEYMEVGKDE IGAFVIVAGS LMGMDNIDAV EAYDFLKSRS KFSQSSAEIV RYLNDLAGFE
501: DDMRRGCVST GLNCYMNQYG VTETEVFREF RKMVMNTCKI MNEEFLKTTD VPLRVLKTNF SCVRSGFVGY NEGEGVTYPE GKITKYLTSL YVDQI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.