Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001557.1-P | Field mustard | plastid | 79.2 | 78.81 |
| CDX75776 | Canola | plastid | 76.37 | 78.19 |
| CDX82475 | Canola | plastid | 75.04 | 77.62 |
| AT3G32030.1 | Thale cress | plastid | 60.73 | 60.43 |
| AT3G14520.1 | Thale cress | plastid | 60.23 | 59.83 |
| AT3G29410.1 | Thale cress | plastid | 59.73 | 59.54 |
| AT3G14540.1 | Thale cress | plastid | 59.57 | 59.47 |
| AT1G31950.3 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole | 59.4 | 58.72 |
| AT1G33750.1 | Thale cress | mitochondrion, plastid | 57.9 | 57.71 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 8.99 | 45.38 |
| AT5G44630.1 | Thale cress | cytosol | 39.43 | 42.55 |
| PGSC0003DMT400050941 | Potato | cytosol | 17.64 | 42.4 |
| PGSC0003DMT400075074 | Potato | cytosol | 14.48 | 41.83 |
| AT4G13300.1 | Thale cress | cytosol | 38.27 | 41.52 |
| AT5G48110.1 | Thale cress | plastid | 23.13 | 41.0 |
| AT4G13280.2 | Thale cress | cytosol | 37.44 | 40.61 |
| AT3G29110.1 | Thale cress | plastid | 40.1 | 40.5 |
| AT1G66020.1 | Thale cress | plastid | 39.93 | 40.13 |
| AT1G70080.1 | Thale cress | mitochondrion | 39.6 | 38.95 |
| AT1G48820.1 | Thale cress | mitochondrion, plastid | 35.61 | 38.15 |
| AT4G15870.1 | Thale cress | plastid | 37.6 | 37.79 |
| AT4G20210.1 | Thale cress | plastid | 37.6 | 37.67 |
| AT1G48800.1 | Thale cress | mitochondrion, plastid | 37.6 | 37.48 |
| AT3G29190.1 | Thale cress | plastid | 37.44 | 37.44 |
| AT4G20200.1 | Thale cress | plastid | 37.44 | 37.25 |
| PGSC0003DMT400047124 | Potato | cytosol | 19.13 | 36.98 |
| AT4G20230.2 | Thale cress | plastid | 37.27 | 36.19 |
| AT2G23230.2 | Thale cress | plastid | 36.77 | 36.17 |
| PGSC0003DMT400070310 | Potato | cytosol | 18.64 | 36.01 |
| Solyc01g101190.2.1 | Tomato | cytosol | 32.78 | 35.69 |
| PGSC0003DMT400079785 | Potato | cytosol | 18.14 | 35.05 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 17.3 | 33.99 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 16.47 | 31.94 |
| Solyc01g101220.1.1 | Tomato | cytosol | 8.65 | 30.95 |
| Os02t0458100-01 | Rice | plastid | 18.97 | 29.16 |
| AT4G16730.1 | Thale cress | cytosol | 24.96 | 27.83 |
| AT2G24210.1 | Thale cress | plastid | 25.79 | 26.23 |
| AT4G16740.1 | Thale cress | mitochondrion | 24.46 | 26.02 |
| AT3G25810.1 | Thale cress | plastid | 25.62 | 25.75 |
| AT3G25820.1 | Thale cress | plastid | 25.62 | 25.67 |
| AT3G25830.1 | Thale cress | plastid | 25.62 | 25.67 |
| KRG93110 | Soybean | mitochondrion | 12.15 | 24.66 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 18.64 | 23.24 |
| AT1G61680.1 | Thale cress | plastid | 20.63 | 21.79 |
| GSMUA_Achr6P24330_001 | Banana | cytosol | 4.99 | 21.28 |
| GSMUA_Achr6P24340_001 | Banana | cytosol | 4.99 | 20.13 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | EntrezGene:820672 | MapMan:9.1.4.2 | ProteinID:AEE75532.1 | ArrayExpress:AT3G14490 |
| EnsemblPlantsGene:AT3G14490 | RefSeq:AT3G14490 | TAIR:AT3G14490 | RefSeq:AT3G14490-TAIR-G | EnsemblPlants:AT3G14490.1 | TAIR:AT3G14490.1 |
| Unigene:At.53313 | ProteinID:BAB01341.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010333 | GO:GO:0016114 | GO:GO:0016829 |
| GO:GO:0046872 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | RefSeq:NP_188067.1 | PFAM:PF01397 |
| PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF22 | UniProt:Q9LRR2 | SUPFAM:SSF48239 | SUPFAM:SSF48576 |
| InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI000004870C |
| SEG:seg | : | : | : | : | : |
Description
TPS17Terpenoid synthase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR2]
Coordinates
chr3:-:4863613..4865949
Molecular Weight (calculated)
70183.1 Da
IEP (calculated)
6.113
GRAVY (calculated)
-0.349
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MEATRTSFGL HNAPLCPTTN PSLFPRRWLH KHTLSLKPAK QHHLVCVRAT ESNDNLESSR PLAHFSPTLW GDHFLSVPLH VAEFDDFSRE IEVTMKPKVR
101: DMLKSSKNSD NERIRLIHLL MNLGIAYHFE IEIDEILGQA FGNLDDIIAK ENDLETISTM FEVFRLRGYY MPCYAFNRFK GEDGRFKESL AEDIRGMLQL
201: YEAAHLGTPS EDIMDEALSF TRYRLESLTS NHTATASPHL SKHIQNALYR ARYHNLEILV AREYISFYEQ EEDHDETLLK FAKLNFNYCQ LHYIQELKDL
301: TKWWKELDLA SKLPYIRDRI VEVYFGALAL YFEPRYSLGR IIVTKITMIV TVFNDTCDAY GTLPEVTSLV DSFQRWDLGD IEKLPSYVKI VFRGVFETLE
401: EIEQEMRPQG RSRIVQVAVD EIKKLGKAYL AISKWARASH VPTFEEYMEF GMQTSMDHFA AYSFIAMEDC DENQTCEWYK SRPKMMEALN GVFRIKNDIN
501: TFEQEMSRGE VAKGLNCYMK QHGVSKEEAI GEMNKIYSNY YKIIMEEYLT TTAVPRPILV RCLNVSRPIH HFYKERDEFT DPYFGMLKEV ITSLFIHPIP
601: L
101: DMLKSSKNSD NERIRLIHLL MNLGIAYHFE IEIDEILGQA FGNLDDIIAK ENDLETISTM FEVFRLRGYY MPCYAFNRFK GEDGRFKESL AEDIRGMLQL
201: YEAAHLGTPS EDIMDEALSF TRYRLESLTS NHTATASPHL SKHIQNALYR ARYHNLEILV AREYISFYEQ EEDHDETLLK FAKLNFNYCQ LHYIQELKDL
301: TKWWKELDLA SKLPYIRDRI VEVYFGALAL YFEPRYSLGR IIVTKITMIV TVFNDTCDAY GTLPEVTSLV DSFQRWDLGD IEKLPSYVKI VFRGVFETLE
401: EIEQEMRPQG RSRIVQVAVD EIKKLGKAYL AISKWARASH VPTFEEYMEF GMQTSMDHFA AYSFIAMEDC DENQTCEWYK SRPKMMEALN GVFRIKNDIN
501: TFEQEMSRGE VAKGLNCYMK QHGVSKEEAI GEMNKIYSNY YKIIMEEYLT TTAVPRPILV RCLNVSRPIH HFYKERDEFT DPYFGMLKEV ITSLFIHPIP
601: L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.