Factsheet for AT4G20230.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G20200.1	Thale cress	plastid	69.79	71.52
AT1G66020.1	Thale cress	plastid	67.85	70.23
Bra020921.1-P	Field mustard	cytosol	42.33	64.69
AT3G29190.1	Thale cress	plastid	62.68	64.56
CDX76457	Canola	plastid	62.36	64.23
CDY54565	Canola	plastid	58.64	63.13
AT3G29110.1	Thale cress	plastid	56.38	58.66
AT4G20210.1	Thale cress	plastid	56.22	58.0
AT1G48800.1	Thale cress	mitochondrion, plastid	52.67	54.06
AT1G48820.1	Thale cress	mitochondrion, plastid	48.3	53.3
AT4G15870.1	Thale cress	plastid	47.82	49.5
AT5G44630.1	Thale cress	cytosol	43.13	47.94
AT4G13280.2	Thale cress	cytosol	42.16	47.11
AT4G13300.1	Thale cress	cytosol	41.03	45.85
AT2G23230.2	Thale cress	plastid	44.91	45.5
AT1G70080.1	Thale cress	mitochondrion	41.52	42.06
AT5G48110.1	Thale cress	plastid	22.13	40.41
VIT_18s0001g04200.t01	Wine grape	cytosol	7.59	39.5
PGSC0003DMT400050941	Potato	cytosol	15.67	38.8
AT3G14490.1	Thale cress	plastid	36.19	37.27
AT3G14540.1	Thale cress	plastid	36.19	37.21
AT3G14520.1	Thale cress	plastid	36.19	37.02
PGSC0003DMT400075074	Potato	cytosol	12.44	37.02
AT3G32030.1	Thale cress	plastid	35.86	36.76
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	35.7	36.35
AT1G33750.1	Thale cress	mitochondrion, plastid	34.57	35.49
AT3G29410.1	Thale cress	plastid	33.44	34.33
PGSC0003DMT400070310	Potato	cytosol	16.32	32.48
Solyc01g101220.1.1	Tomato	cytosol	8.56	31.55
Solyc01g101190.2.1	Tomato	cytosol	27.95	31.34
PGSC0003DMT400079785	Potato	cytosol	15.67	31.19
PGSC0003DMT400047124	Potato	cytosol	15.35	30.55
Os02t0458100-01	Rice	plastid	17.45	27.62
VIT_18s0001g04510.t01	Wine grape	plastid	13.25	26.8
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	13.41	26.77
AT3G25810.1	Thale cress	plastid	23.26	24.08
AT2G24210.1	Thale cress	plastid	22.78	23.86
KRG93110	Soybean	mitochondrion	11.31	23.65
AT3G25830.1	Thale cress	plastid	22.78	23.5
AT3G25820.1	Thale cress	plastid	22.78	23.5
GSMUA_Achr6P24340_001	Banana	cytosol	5.65	23.49
GSMUA_Achr6P24330_001	Banana	cytosol	5.33	23.4
AT4G16730.1	Thale cress	cytosol	20.36	23.38
AT4G16740.1	Thale cress	mitochondrion	21.0	23.01
AT1G61680.1	Thale cress	plastid	20.19	21.97
VIT_18s0001g05430.t01	Wine grape	cytosol	15.35	19.71

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:827770	MapMan:9.1.4.2	UniProt:A0A1P8B581	ProteinID:AEE84287.2
EMBL:AF497487	EMBL:AK221612	ProteinID:ANM66745.1	ArrayExpress:AT4G20230	EnsemblPlantsGene:AT4G20230	RefSeq:AT4G20230
TAIR:AT4G20230	RefSeq:AT4G20230-TAIR-G	EnsemblPlants:AT4G20230.2	EMBL:AY133718	Unigene:At.32735	ProteinID:CAA18248.1
ProteinID:CAB79023.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0010333	GO:GO:0016114	GO:GO:0016829	GO:GO:0046872
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_001320004.1	RefSeq:NP_193756.3	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31045	PANTHER:PTHR31045:SF4	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000848FF9E	:

Description

Terpenoid cyclases/Protein prenyltransferases superfamily protein [Source:TAIR;Acc:AT4G20230]

Coordinates

chr4:-:10924100..10926833

Molecular Weight (calculated)

71779.8 Da

IEP (calculated)

6.755

GRAVY (calculated)

-0.219

Length

619 amino acids

Sequence
(BLAST)

001: MVTIDSISFV MNMEATSVFR PKLGSQFSLP STTNLFPLRK LYGFPLTSFP GKPIKRIRLK ATNTLTFDDK ERTRKFKKLP LSEWTHYFHS IPLDISEMDA
101: LKEEIDELKP KVKNTFMSSQ GSDSTKTKIL MIYLFVSLGL AYHFEEEIYE TLKEGFENIE KIMAGEEDLY TVSIIFWVFR RYGHYISSDV FQRFKGSNGS
201: FKESLIGDAK GMLSLYEAAH LATTKDYILD EALIFTSSHL ETLVATGTCP PHLLARIRNA LSICQHWNFE VLVPLDFIPF YEQEKDHDEM LLKFAKLSFK
301: YLKLIYLQDL KILTKWYKKL DFPSKFPPYF KDRCVENYFF VLPVFFEPQL SSARMLLTKG FILLGIQDDT FDRYASISEA ESLGNSLKRW APDHSMDKQP
401: EYLKSVLKVI LDTFQEFEKE LSPEGRSYSV KYTIEEFQAS SKANVELAKW AQVSHVPSFE KYMEVGQMEI TACVTVAYIL MSMGKTGTKE AFEWLKSRPK
501: LVQSLCTKGR LMNDIAGFED DMSRGYVVNA VNCYMKQYGV TEKEAFKELR KMVVNTHKTL NEEFLTTTCV SHYVLRETMD FARMIIVTYN GYEGFTRPDE
601: GKIEEYMTSL FVDHTLKML

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.