Factsheet for AT2G24210.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90785	Canola	plastid	77.16	76.9
Bra000727.1-P	Field mustard	plastid	64.47	74.85
Bra000568.1-P	Field mustard	plastid	74.11	73.61
CDX83208	Canola	plastid	73.77	73.28
CDY21487	Canola	plastid	73.6	73.11
AT3G25820.1	Thale cress	plastid	64.3	63.33
AT3G25830.1	Thale cress	plastid	64.3	63.33
AT3G25810.1	Thale cress	plastid	62.27	61.54
CDY68788	Canola	endoplasmic reticulum, golgi	40.95	57.62
VIT_13s0067g00300.t01	Wine grape	cytosol	14.72	55.06
VIT_13s0067g03770.t01	Wine grape	cytosol	31.3	53.31
AT4G16740.1	Thale cress	mitochondrion	50.42	52.74
VIT_13s0067g00090.t01	Wine grape	cytosol	31.13	52.57
AT4G16730.1	Thale cress	cytosol	45.85	50.28
VIT_00s2271g00010.t01	Wine grape	cytosol	32.83	49.11
VIT_00s0724g00010.t01	Wine grape	cytosol	35.36	48.95
VIT_13s0067g00320.t01	Wine grape	cytosol	9.64	48.31
VIT_13s0084g00010.t01	Wine grape	cytosol	43.65	46.82
GSMUA_Achr4P07690_001	Banana	cytosol	13.54	46.78
VIT_13s0067g03700.t01	Wine grape	cytosol	43.82	45.76
VIT_13s0067g03740.t01	Wine grape	cytosol	31.64	44.31
Solyc02g079840.1.1	Tomato	cytosol	39.76	43.68
VIT_13s0067g00130.t01	Wine grape	plastid	38.41	43.57
PGSC0003DMT400089009	Potato	cytosol	11.68	42.86
VIT_13s0067g00370.t01	Wine grape	plastid	42.47	42.54
PGSC0003DMT400055897	Potato	cytosol	8.63	42.15
VIT_13s0019g00060.t01	Wine grape	plastid	41.46	41.25
VIT_13s0067g03790.t01	Wine grape	plastid	41.29	41.15
VIT_13s0067g03830.t01	Wine grape	plastid	27.41	36.82
KRH22502	Soybean	cytosol	8.97	30.29
AT1G61680.1	Thale cress	plastid	26.57	27.59
AT3G29410.1	Thale cress	plastid	26.9	26.37
AT3G14490.1	Thale cress	plastid	26.23	25.79
AT1G70080.1	Thale cress	mitochondrion	26.4	25.53
AT3G14520.1	Thale cress	plastid	26.06	25.45
AT5G48110.1	Thale cress	plastid	14.55	25.37
AT3G14540.1	Thale cress	plastid	25.38	24.92
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	25.21	24.51
AT1G33750.1	Thale cress	mitochondrion, plastid	24.87	24.38
AT4G15870.1	Thale cress	plastid	24.37	24.08
AT1G48820.1	Thale cress	mitochondrion, plastid	22.84	24.06
AT3G29110.1	Thale cress	plastid	23.86	23.7
AT3G32030.1	Thale cress	plastid	24.2	23.68
AT4G13300.1	Thale cress	cytosol	22.17	23.65
AT4G13280.2	Thale cress	cytosol	22.17	23.65
AT1G66020.1	Thale cress	plastid	23.86	23.58
AT4G20200.1	Thale cress	plastid	24.03	23.51
AT1G48800.1	Thale cress	mitochondrion, plastid	23.86	23.38
AT5G44630.1	Thale cress	cytosol	22.0	23.34
AT4G20210.1	Thale cress	plastid	23.52	23.17
AT2G23230.2	Thale cress	plastid	23.86	23.08
AT4G20230.2	Thale cress	plastid	23.86	22.78
AT3G29190.1	Thale cress	plastid	22.67	22.3

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:816955	MapMan:9.1.4.2	ProteinID:AAD03382.1	ProteinID:AEC07543.1
EMBL:AF178535	ArrayExpress:AT2G24210	EnsemblPlantsGene:AT2G24210	RefSeq:AT2G24210	TAIR:AT2G24210	RefSeq:AT2G24210-TAIR-G
EnsemblPlants:AT2G24210.1	TAIR:AT2G24210.1	Unigene:At.28690	EMBL:BT033153	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009605	GO:GO:0009607	GO:GO:0009611	GO:GO:0009719
GO:GO:0009753	GO:GO:0009987	GO:GO:0010333	GO:GO:0016099	GO:GO:0016114	GO:GO:0016829
GO:GO:0034768	GO:GO:0046872	GO:GO:0050551	GO:GO:0080027	GO:GO:0102701	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_179998.1	PFAM:PF01397	PFAM:PF03936	PO:PO:0000293
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616
PO:PO:0009009	PO:PO:0009010	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	UniProt:Q9ZUH4
SUPFAM:SSF48239	SUPFAM:SSF48576	Symbol:TPS10	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000004857B	:	:	:

Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]

Coordinates

chr2:+:10294286..10297597

Molecular Weight (calculated)

69282.6 Da

IEP (calculated)

5.992

GRAVY (calculated)

-0.397

Length

591 amino acids

Sequence
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.