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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83208 Canola plastid 96.13 96.13
CDX90785 Canola plastid 78.66 78.92
AT2G24210.1 Thale cress plastid 73.11 73.6
CDY66920 Canola cytosol 36.13 64.95
CDX76827 Canola plastid 59.83 63.69
CDY68788 Canola endoplasmic reticulum, golgi 44.54 63.1
CDY13587 Canola plastid 60.5 61.12
CDX83558 Canola plastid 60.34 60.95
CDX83560 Canola plastid 57.65 60.71
CDY13589 Canola plastid 56.64 60.5
CDY53648 Canola cytosol 24.03 55.86
CDY53129 Canola cytosol 24.03 55.86
CDY15827 Canola cytosol 13.61 52.26
CDY68676 Canola cytosol 32.94 52.13
CDY13590 Canola endoplasmic reticulum, extracellular, plastid 59.83 52.12
VIT_13s0067g00300.t01 Wine grape cytosol 13.61 51.27
CDY54750 Canola cytosol 33.95 50.37
CDY62515 Canola cytosol 33.11 49.13
CDY72187 Canola cytosol, mitochondrion, nucleus, plastid 20.67 49.0
VIT_13s0067g03770.t01 Wine grape cytosol 28.57 48.99
VIT_13s0067g00090.t01 Wine grape cytosol 27.73 47.14
VIT_13s0067g00320.t01 Wine grape cytosol 9.08 45.76
PGSC0003DMT400055897 Potato cytosol 9.24 45.45
PGSC0003DMT400089009 Potato cytosol 12.27 45.34
VIT_00s2271g00010.t01 Wine grape cytosol 30.08 45.32
VIT_00s0724g00010.t01 Wine grape cytosol 32.1 44.73
VIT_13s0084g00010.t01 Wine grape cytosol 40.0 43.19
VIT_13s0067g03700.t01 Wine grape cytosol 40.84 42.93
VIT_13s0067g03740.t01 Wine grape cytosol 30.42 42.89
Solyc02g079840.1.1 Tomato cytosol 38.49 42.57
GSMUA_Achr4P07690_001 Banana cytosol 11.93 41.52
VIT_13s0067g00130.t01 Wine grape plastid 35.29 40.31
VIT_13s0067g03790.t01 Wine grape plastid 39.83 39.97
VIT_13s0019g00060.t01 Wine grape plastid 39.33 39.39
VIT_13s0067g00370.t01 Wine grape plastid 38.66 38.98
CDY14934 Canola cytosol 1.01 37.5
VIT_13s0067g03830.t01 Wine grape plastid 27.39 37.05
CDY18347 Canola cytosol 8.24 29.52
KRH22502 Soybean cytosol 8.57 29.14
CDX87217 Canola plastid 28.24 27.95
CDY68962 Canola cytosol 22.86 26.98
CDY12909 Canola cytosol 10.42 26.72
CDY02143 Canola plastid 24.37 26.22
CDY70719 Canola cytosol 15.29 26.15
CDY39124 Canola cytoskeleton, cytosol, plastid 24.37 25.94
CDY69236 Canola cytosol 21.01 25.83
CDX75776 Canola plastid 25.38 25.72
CDY27296 Canola cytosol 8.4 25.64
CDX98661 Canola cytosol 23.7 25.31
CDX82475 Canola plastid 24.37 24.96
CDY49723 Canola plastid 24.87 24.83
CDY12910 Canola plastid 6.22 24.83
CDY63249 Canola cytosol 23.19 24.82
CDY39119 Canola plastid 25.04 24.75
CDX98470 Canola plastid 24.2 24.66
CDX95273 Canola plastid 17.31 24.58
CDX82478 Canola cytosol 22.18 24.58
CDX74453 Canola cytosol 21.85 24.48
CDY14933 Canola cytosol 20.0 24.39
CDX76457 Canola plastid 24.54 24.29
CDY71184 Canola cytosol 13.61 24.25
CDY42473 Canola cytosol 22.86 24.2
CDX98659 Canola plastid 24.87 23.95
CDY41707 Canola plastid 23.36 23.88
CDY32356 Canola plastid 24.87 23.87
CDY06577 Canola cytosol 13.11 23.78
CDY13053 Canola extracellular 22.02 23.69
CDX76471 Canola plastid 23.7 23.38
CDY09324 Canola plastid 23.53 23.37
CDX95274 Canola cytosol 5.21 23.31
CDY67821 Canola cytosol 7.39 22.68
CDX82477 Canola plastid 11.43 22.67
CDY54565 Canola plastid 21.68 22.43
CDY61957 Canola plastid 13.95 21.96
CDY23121 Canola cytosol 13.78 21.58
CDY09325 Canola plastid 9.75 21.48
CDY01639 Canola cytosol 6.89 21.24
CDX75774 Canola cytosol, golgi, mitochondrion, plasma membrane 13.28 20.73
CDX75775 Canola plastid 15.29 18.8
Protein Annotations
Gene3D:1.10.600.10Gene3D:1.50.10.130MapMan:9.1.4.2GO:A0A078G8Y9UniProt:A0A078G8Y9EnsemblPlants:CDY21487
ProteinID:CDY21487ProteinID:CDY21487.1GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0010333GO:GO:0016829GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00015913001
InterPro:IPR008949InterPro:IPR036965InterPro:Isoprenoid_synthase_dom_sfPFAM:PF01397PFAM:PF03936PANTHER:PTHR31225
PANTHER:PTHR31225:SF16SUPFAM:SSF48239SUPFAM:SSF48576InterPro:Terpene_cyclase_like_1_CInterPro:Terpene_synth_NInterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bdInterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI0004EDCB87:::
Description
BnaC03g27100DBnaC03g27100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8Y9]
Coordinates
chrLK032121:+:509518..517074
Molecular Weight (calculated)
69265.8 Da
IEP (calculated)
6.144
GRAVY (calculated)
-0.331
Length
595 amino acids
Sequence
(BLAST)
001: MASLVQMGSP LIYSKALAKT TQRPQPFTCT IVAKTTPGSE SPSDPRRSAN YRPSLWDHHH LLSVKNKYTN IKSVRERDLL KETVRKMLDH ERSTHVDQLE
101: LIDDLQKLGV SYHFEQEIDN MLTFTYHKLD KSNFMEYDME YDLHANALKF RLLRQHGFNV SEDVFDVFHE NCGKFESGEI NGFISLYEAS YLSTKSDTKL
201: QNYIRFFATQ QLRDFVDTHS NKNCASFGVG EMVAQALDMP YHWRMRRLAT RSYINLYGMK PNKNPVLVEL AKLDFNIVQA VYQEELKYVS SWWRETGLAN
301: QLHFSRDRIV ENYFWTIGQI QEPQFGYVRR IMAKLYTLLT TIDDIYDIYG TLEELQLLTA AFASWDVNRL DELPEYMRLC FLVVYNEVNS IGCDILRNKN
401: INVIPFLRKS WADVSNAFLI EAIWYKRGHK PNTEEYMQNA WKSIGVPTIC VHFYCVFSDQ LSVQVLETLS EHLQDVVRCS AFVVRLANDL VTSQEELERG
501: DVLKSIQCYM NETGASQEKA CVHVQQIIND MWDEMNYEKT KCRSLLIPQD FVESVMNLAR MSQCMYQYGD GHGSPEKAKI VDSVMSLLFN PIILD
Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)
001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D
Arabidopsis Description
TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.