Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95274 | Canola | cytosol | 21.05 | 60.15 |
| CDY13053 | Canola | extracellular | 86.58 | 59.49 |
| AT1G48800.1 | Thale cress | mitochondrion, plastid | 71.58 | 45.11 |
| AT1G48820.1 | Thale cress | mitochondrion, plastid | 65.26 | 44.21 |
| CDY41707 | Canola | plastid | 61.32 | 40.03 |
| CDY68962 | Canola | cytosol | 50.53 | 38.1 |
| CDY69236 | Canola | cytosol | 46.84 | 36.78 |
| CDX98661 | Canola | cytosol | 52.37 | 35.73 |
| CDY70719 | Canola | cytosol | 31.32 | 34.2 |
| CDY71184 | Canola | cytosol | 28.95 | 32.93 |
| CDX95273 | Canola | plastid | 34.47 | 31.26 |
| CDY06577 | Canola | cytosol | 26.58 | 30.79 |
| CDX98659 | Canola | plastid | 49.47 | 30.42 |
| CDY09324 | Canola | plastid | 47.89 | 30.38 |
| CDX76471 | Canola | plastid | 48.16 | 30.35 |
| PGSC0003DMT400070310 | Potato | cytosol | 24.74 | 30.23 |
| CDX76457 | Canola | plastid | 46.84 | 29.62 |
| CDX74453 | Canola | cytosol | 41.05 | 29.38 |
| CDY54565 | Canola | plastid | 44.21 | 29.22 |
| CDY18347 | Canola | cytosol | 12.63 | 28.92 |
| PGSC0003DMT400079785 | Potato | cytosol | 23.42 | 28.62 |
| CDY14933 | Canola | cytosol | 36.58 | 28.48 |
| CDY49723 | Canola | plastid | 44.21 | 28.19 |
| CDY63249 | Canola | cytosol | 40.53 | 27.7 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 8.42 | 26.89 |
| CDX75774 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 26.84 | 26.77 |
| PGSC0003DMT400075074 | Potato | cytosol | 14.47 | 26.44 |
| CDY42473 | Canola | cytosol | 38.42 | 25.98 |
| CDX82478 | Canola | cytosol | 35.79 | 25.33 |
| CDY01639 | Canola | cytosol | 12.11 | 23.83 |
| CDY39124 | Canola | cytoskeleton, cytosol, plastid | 34.21 | 23.26 |
| PGSC0003DMT400050941 | Potato | cytosol | 15.26 | 23.2 |
| CDY27296 | Canola | cytosol | 11.32 | 22.05 |
| CDX75776 | Canola | plastid | 33.16 | 21.47 |
| CDY32356 | Canola | plastid | 35.0 | 21.45 |
| Solyc01g101190.2.1 | Tomato | cytosol | 30.79 | 21.2 |
| CDY66920 | Canola | cytosol | 18.42 | 21.15 |
| CDY39119 | Canola | plastid | 33.42 | 21.1 |
| CDX87217 | Canola | plastid | 32.89 | 20.8 |
| CDX98470 | Canola | plastid | 31.05 | 20.21 |
| CDX82475 | Canola | plastid | 30.79 | 20.14 |
| Solyc01g101220.1.1 | Tomato | cytosol | 8.68 | 19.64 |
| CDY02143 | Canola | plastid | 28.42 | 19.53 |
| GSMUA_Achr6P24330_001 | Banana | cytosol | 7.11 | 19.15 |
| CDY53129 | Canola | cytosol | 12.89 | 19.14 |
| CDY53648 | Canola | cytosol | 12.89 | 19.14 |
| GSMUA_Achr6P24340_001 | Banana | cytosol | 7.37 | 18.79 |
| CDY14934 | Canola | cytosol | 0.79 | 18.75 |
| CDY62515 | Canola | cytosol | 18.68 | 17.71 |
| CDY54750 | Canola | cytosol | 18.68 | 17.71 |
| CDY67821 | Canola | cytosol | 8.95 | 17.53 |
| CDY12909 | Canola | cytosol | 10.26 | 16.81 |
| CDX76827 | Canola | plastid | 22.89 | 15.56 |
| CDY13587 | Canola | plastid | 23.42 | 15.11 |
| CDX83558 | Canola | plastid | 23.42 | 15.11 |
| CDX83560 | Canola | plastid | 22.37 | 15.04 |
| Os02t0458100-01 | Rice | plastid | 15.0 | 14.58 |
| KRG93110 | Soybean | mitochondrion | 11.32 | 14.53 |
| CDX90785 | Canola | plastid | 22.37 | 14.33 |
| CDY21487 | Canola | plastid | 21.58 | 13.78 |
| CDX83208 | Canola | plastid | 21.32 | 13.61 |
| PGSC0003DMT400047124 | Potato | cytosol | 11.05 | 13.5 |
| CDY13589 | Canola | plastid | 18.95 | 12.93 |
| CDX82477 | Canola | plastid | 10.0 | 12.67 |
| CDX75775 | Canola | plastid | 16.05 | 12.6 |
| CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 21.58 | 12.01 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 9.47 | 11.61 |
| CDY61957 | Canola | plastid | 11.05 | 11.11 |
| CDY68676 | Canola | cytosol | 10.53 | 10.64 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 8.16 | 10.13 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 12.11 | 9.54 |
| CDY09325 | Canola | plastid | 5.79 | 8.15 |
| CDY68788 | Canola | endoplasmic reticulum, golgi | 8.68 | 7.86 |
| CDY72187 | Canola | cytosol, mitochondrion, nucleus, plastid | 4.47 | 6.77 |
| CDY15827 | Canola | cytosol | 2.63 | 6.45 |
| CDY12910 | Canola | plastid | 1.05 | 2.68 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:A0A078GCM0 | UniProt:A0A078GCM0 | EnsemblPlants:CDY23121 |
| ProteinID:CDY23121 | ProteinID:CDY23121.1 | ncoils:Coil | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | EnsemblPlantsGene:GSBRNA2T00021628001 |
| InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 |
| PANTHER:PTHR31225:SF22 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd |
| InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0004EE8113 | : | : | : | : |
Description
BnaC09g18750DBnaC09g18750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCM0]
Coordinates
chrLK032140:+:303907..305917
Molecular Weight (calculated)
44337.5 Da
IEP (calculated)
4.906
GRAVY (calculated)
-0.223
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGDHGEFK ECLTRDAKGI LSLYEAAHMR TTTDYILDEA LTFTLNNLES LSCTCKPNLS RLIRNSLDLP QHKNMEILVA EEFIRWYKEQ DFHSKLAPYY
101: RDILVELDLH TLTYLEPKLS RVSIFLTKFY TMQIILDDTC DRYASFREVE ILVDIFGRWD LEDHAMDGLP DYLKSVVKFV FGTFQEFERE IGSELGGLYS
201: LEVTIEYFKI YMRSNLQLAK WASVDHLPSF EEYLDVAGIE IAVVFTLACV LMAMENICKE EAYEWLKSRE KLVRAMTTKA RVPNDMFGYE DDMSRGYLTG
301: SVNCYKKQYG VSEEEAFRKL RQLTAEIDKM MDEELLKPIN VPRQVLKVVM IDTLRAINVA YDKRDGFNRR DGHLKNITSM
101: RDILVELDLH TLTYLEPKLS RVSIFLTKFY TMQIILDDTC DRYASFREVE ILVDIFGRWD LEDHAMDGLP DYLKSVVKFV FGTFQEFERE IGSELGGLYS
201: LEVTIEYFKI YMRSNLQLAK WASVDHLPSF EEYLDVAGIE IAVVFTLACV LMAMENICKE EAYEWLKSRE KLVRAMTTKA RVPNDMFGYE DDMSRGYLTG
301: SVNCYKKQYG VSEEEAFRKL RQLTAEIDKM MDEELLKPIN VPRQVLKVVM IDTLRAINVA YDKRDGFNRR DGHLKNITSM
001: MEAIRVFGPK LGSRLSIRSH TTAFPACKLS RFPLTSFPGK HAHLVLLKAT TIPLASGDKE NNRKFEKLGP SEWGNQFLFA HVDLSEMDAL EREIEALKPK
101: VRDMFMSFKG MKSNKKNLFL IYLLVSLGLA HHFEDEIEES VKGCSQEMVE MMDGENDLYT VSIIFWVFRT YGHNISSDIF NRFKGHNGKF KECLATDAKG
201: ILSLYEAAHM GTTTDYILDE ALSFTLSYLE SLAANGTCKP NLVRRIRNAL GLLQNKNVEI LVAKEYIRFY EQEEDCDKTI LEFSMLNLKF LQLHYLQELK
301: LLTKWYKEQD FESKLPPYYR DRIVELHLAT LAYINPKYSR VRIILTMIYT IQIILDDTCD RYASLREVES LAATIERWDH NDHAMEGLPD YLKSVAKFIF
401: HTFQEFEREV SSESGGSYSL KATIEDCKRM MRSNLQLAKW AVTGHLPSFD EYLDVAGVEI AVYFTVAGIL LGMENINKKE AYEWLIFRDK LVRAMSTKAR
501: LVNDLFGYKD DMRRGYVTNS INCYKKQYGV TEEEAFRKLH QMVADGDKMM NEEFLKPINV PHQVLKAVLD TLRAINICYD NEDGFTRLNG NLKNYITSMY
601: VDL
101: VRDMFMSFKG MKSNKKNLFL IYLLVSLGLA HHFEDEIEES VKGCSQEMVE MMDGENDLYT VSIIFWVFRT YGHNISSDIF NRFKGHNGKF KECLATDAKG
201: ILSLYEAAHM GTTTDYILDE ALSFTLSYLE SLAANGTCKP NLVRRIRNAL GLLQNKNVEI LVAKEYIRFY EQEEDCDKTI LEFSMLNLKF LQLHYLQELK
301: LLTKWYKEQD FESKLPPYYR DRIVELHLAT LAYINPKYSR VRIILTMIYT IQIILDDTCD RYASLREVES LAATIERWDH NDHAMEGLPD YLKSVAKFIF
401: HTFQEFEREV SSESGGSYSL KATIEDCKRM MRSNLQLAKW AVTGHLPSFD EYLDVAGVEI AVYFTVAGIL LGMENINKKE AYEWLIFRDK LVRAMSTKAR
501: LVNDLFGYKD DMRRGYVTNS INCYKKQYGV TEEEAFRKLH QMVADGDKMM NEEFLKPINV PHQVLKAVLD TLRAINICYD NEDGFTRLNG NLKNYITSMY
601: VDL
Arabidopsis Description
TPS28Terpenoid synthase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9C748]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.