CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83560	Canola	plastid	82.23	81.06
AT3G25820.1	Thale cress	plastid	76.3	70.83
AT3G25830.1	Thale cress	plastid	76.3	70.83
AT3G25810.1	Thale cress	plastid	73.97	68.9
CDX83558	Canola	plastid	72.17	68.25
CDY13587	Canola	plastid	71.99	68.08
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	81.69	66.62
CDY66920	Canola	cytosol	37.34	62.84
CDX76827	Canola	plastid	60.86	60.64
CDY15827	Canola	cytosol	16.16	58.06
CDX90785	Canola	plastid	61.22	57.5
CDY53648	Canola	cytosol	26.39	57.42
CDY53129	Canola	cytosol	26.39	57.42
CDX83208	Canola	plastid	60.68	56.81
CDY21487	Canola	plastid	60.5	56.64
VIT_13s0067g00320.t01	Wine grape	cytosol	10.77	50.85
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	22.44	49.8
VIT_13s0067g03770.t01	Wine grape	cytosol	29.44	47.26
CDY54750	Canola	cytosol	33.93	47.13
CDY68676	Canola	cytosol	31.6	46.81
CDY62515	Canola	cytosol	33.39	46.38
VIT_13s0067g00090.t01	Wine grape	cytosol	28.73	45.71
GSMUA_Achr4P07690_001	Banana	cytosol	14.0	45.61
CDY14934	Canola	cytosol	1.26	43.75
VIT_13s0067g03700.t01	Wine grape	cytosol	44.17	43.46
VIT_13s0084g00010.t01	Wine grape	cytosol	42.55	43.01
VIT_00s0724g00010.t01	Wine grape	cytosol	32.85	42.86
VIT_00s2271g00010.t01	Wine grape	cytosol	30.16	42.53
Solyc02g079840.1.1	Tomato	cytosol	39.86	41.26
CDY68788	Canola	endoplasmic reticulum, golgi	31.06	41.19
VIT_13s0067g00370.t01	Wine grape	plastid	41.83	39.49
VIT_13s0067g03740.t01	Wine grape	cytosol	29.62	39.1
PGSC0003DMT400055897	Potato	cytosol	8.44	38.84
VIT_13s0067g00130.t01	Wine grape	plastid	36.27	38.77
VIT_13s0067g03790.t01	Wine grape	plastid	40.4	37.94
VIT_13s0019g00060.t01	Wine grape	plastid	40.22	37.71
VIT_13s0067g00300.t01	Wine grape	cytosol	10.41	36.71
VIT_13s0067g03830.t01	Wine grape	plastid	26.21	33.18
PGSC0003DMT400089009	Potato	cytosol	9.52	32.92
KRH22502	Soybean	cytosol	9.87	31.43
CDY12910	Canola	plastid	7.0	26.17
CDX95274	Canola	cytosol	6.1	25.56
CDY18347	Canola	cytosol	7.18	24.1
CDY68962	Canola	cytosol	21.01	23.21
CDY39124	Canola	cytoskeleton, cytosol, plastid	23.16	23.08
CDX87217	Canola	plastid	24.24	22.46
CDY09324	Canola	plastid	23.88	22.2
CDY69236	Canola	cytosol	19.21	22.11
CDY12909	Canola	cytosol	9.16	21.98
CDY09325	Canola	plastid	10.59	21.85
CDY01639	Canola	cytosol	7.54	21.76
CDX98661	Canola	cytosol	21.72	21.72
CDX75776	Canola	plastid	22.8	21.64
CDY13053	Canola	extracellular	21.36	21.52
CDX82475	Canola	plastid	22.26	21.34
CDY02143	Canola	plastid	21.01	21.16
CDY49723	Canola	plastid	22.62	21.14
CDX82477	Canola	plastid	11.31	21.0
CDY42473	Canola	cytosol	21.18	21.0
CDX98659	Canola	plastid	22.98	20.71
CDX76457	Canola	plastid	22.26	20.63
CDY39119	Canola	plastid	22.26	20.6
CDY63249	Canola	cytosol	20.47	20.5
CDY14933	Canola	cytosol	17.95	20.49
CDY41707	Canola	plastid	21.36	20.45
CDY70719	Canola	cytosol	12.75	20.4
CDX98470	Canola	plastid	21.36	20.38
CDX74453	Canola	cytosol	19.21	20.15
CDX82478	Canola	cytosol	19.39	20.11
CDY67821	Canola	cytosol	7.0	20.1
CDY32356	Canola	plastid	22.26	20.0
CDY06577	Canola	cytosol	11.67	19.82
CDX76471	Canola	plastid	21.36	19.73
CDX95273	Canola	plastid	14.72	19.57
CDY54565	Canola	plastid	20.11	19.48
CDY23121	Canola	cytosol	12.93	18.95
CDY61957	Canola	plastid	12.57	18.52
CDY71184	Canola	cytosol	10.95	18.26
CDX75775	Canola	plastid	13.46	15.5
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	9.87	14.44
CDY27296	Canola	cytosol	4.67	13.33

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:50.4.2	GO:A0A078FKZ6	UniProt:A0A078FKZ6	EnsemblPlants:CDY13589
ProteinID:CDY13589	ProteinID:CDY13589.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00077997001	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EEF4A2	:	:	:	:	:

Description

BnaA06g33340DBnaA06g33340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKZ6]

Coordinates

chrLK032037:+:118483..121344

Molecular Weight (calculated)

65327.5 Da

IEP (calculated)

6.625

GRAVY (calculated)

-0.348

Length

557 amino acids

Sequence
(BLAST)

001: MASLYMTSAL IYQNAITHNN FRFPSFICRS MTKMTPDNVS VDVLRRRSGN YQPSPWDHSY LLSINNKYAK EEKVIARDLL KEKVRKMLGA ETKSRREQLE
101: LIDDLQKLGI SYHFEVEINN ILMDFHHKNG RGVWKCDKEE DLHATSLEFR LLRQHGFHVS EDIFDVIIDK IESETFKSDD INSIISLYEA SYLSTKSDIK
201: LREVIRPFAK KQIRKFVDGE TCNLEVREKA IHALEMPYHW RMRRLETRWY LDSYDNKHDT NLVLIEFAKL DFNIVQIAHQ EDLKYVSSWW KETCLSMHLL
301: QPLTTFTIYM ALHEELELFT AMVHNWDVNR LDELPEYMRL CFLILFNEIN SIGCDIFKYK NIDVIPFLRK SWADLCNTYL VEAKWYKKGY KPGVEEYMQN
401: AWISISAPTI LIHFYCIFSD KISVQILETL SQHRQEIVRC SATILRLAND LGTSRDELAR GDVLKSAQCY THETGASEEE AHAHVQQMIC DTWDEINYET
501: KMARTYSLLS RGFVEAAVNL ARMSQCMYQY GDGHGCPDKA KTVERVMSLL VNPVPLR

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.