CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09325	Canola	plastid	40.96	91.48
CDY09324	Canola	plastid	82.59	83.14
AT1G66020.1	Thale cress	plastid	65.67	66.22
AT4G20200.1	Thale cress	plastid	65.67	65.56
CDX76457	Canola	plastid	64.01	64.23
CDX98659	Canola	plastid	64.51	62.95
CDY01639	Canola	cytosol	19.57	61.14
CDY18347	Canola	cytosol	16.75	60.84
CDY54565	Canola	plastid	57.55	60.35
CDY70719	Canola	cytosol	32.84	56.9
CDY68962	Canola	cytosol	47.1	56.35
CDY14934	Canola	cytosol	1.49	56.25
CDX98661	Canola	cytosol	51.58	55.83
CDY69236	Canola	cytosol	44.78	55.79
CDX95273	Canola	plastid	37.98	54.65
CDY49723	Canola	plastid	53.73	54.36
CDY41707	Canola	plastid	49.75	51.55
CDY13053	Canola	extracellular	46.77	50.99
CDY42473	Canola	cytosol	45.94	49.29
CDY23121	Canola	cytosol	30.35	48.16
CDX74453	Canola	cytosol	40.13	45.57
CDY14933	Canola	cytosol	36.65	45.29
CDY63249	Canola	cytosol	41.63	45.14
CDX95274	Canola	cytosol	9.45	42.86
CDY71184	Canola	cytosol	23.05	41.62
PGSC0003DMT400050941	Potato	cytosol	16.09	38.8
CDY67821	Canola	cytosol	12.44	38.66
CDX82478	Canola	cytosol	34.16	38.36
CDY27296	Canola	cytosol	12.27	37.95
VIT_18s0001g04200.t01	Wine grape	cytosol	7.46	37.82
CDX75776	Canola	plastid	35.49	36.46
CDY39124	Canola	cytoskeleton, cytosol, plastid	33.5	36.14
PGSC0003DMT400075074	Potato	cytosol	12.44	36.06
CDX82477	Canola	plastid	17.91	36.0
CDY06577	Canola	cytosol	19.4	35.67
CDX82475	Canola	plastid	33.83	35.11
CDY02143	Canola	plastid	32.17	35.08
Solyc01g101220.1.1	Tomato	cytosol	9.62	34.52
CDX87217	Canola	plastid	34.33	34.44
CDY39119	Canola	plastid	34.16	34.22
CDX98470	Canola	plastid	32.84	33.9
CDY32356	Canola	plastid	33.66	32.74
Solyc01g101190.2.1	Tomato	cytosol	29.85	32.61
PGSC0003DMT400070310	Potato	cytosol	16.75	32.48
PGSC0003DMT400079785	Potato	cytosol	16.25	31.51
PGSC0003DMT400047124	Potato	cytosol	16.09	31.19
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	19.24	30.45
Os02t0458100-01	Rice	plastid	18.08	27.88
CDY15827	Canola	cytosol	6.97	27.1
CDX75775	Canola	plastid	21.56	26.86
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	13.76	26.77
CDY66920	Canola	cytosol	14.26	25.98
VIT_18s0001g04510.t01	Wine grape	plastid	13.1	25.82
CDX76827	Canola	plastid	22.72	24.51
CDX90785	Canola	plastid	23.88	24.28
CDY21487	Canola	plastid	23.38	23.7
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	9.78	23.51
CDY13587	Canola	plastid	22.89	23.43
KRG93110	Soybean	mitochondrion	11.44	23.31
CDX83558	Canola	plastid	22.72	23.26
CDX83208	Canola	plastid	22.72	23.03
CDY62515	Canola	cytosol	15.26	22.94
CDY68676	Canola	cytosol	14.26	22.87
CDX83560	Canola	plastid	21.39	22.83
CDY54750	Canola	cytosol	15.09	22.69
CDY13589	Canola	plastid	19.73	21.36
CDY68788	Canola	endoplasmic reticulum, golgi	14.59	20.95
GSMUA_Achr6P24330_001	Banana	cytosol	4.81	20.57
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	23.05	20.35
GSMUA_Achr6P24340_001	Banana	cytosol	4.98	20.13
CDY53648	Canola	cytosol	8.29	19.53
CDY53129	Canola	cytosol	8.29	19.53
CDY12909	Canola	cytosol	7.46	19.4
VIT_18s0001g05430.t01	Wine grape	cytosol	15.42	19.29
CDY61957	Canola	plastid	10.95	17.46
CDY12910	Canola	plastid	3.81	15.44

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078CGX3	EnsemblPlants:CDX76471	ProteinID:CDX76471
ProteinID:CDX76471.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00126884001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EF4236	:	:	:	:	:

Description

BnaA08g09290D

Coordinates

chrLK031807:+:1408710..1411457

Molecular Weight (calculated)

69651.0 Da

IEP (calculated)

5.928

GRAVY (calculated)

-0.196

Length

603 amino acids

Sequence
(BLAST)

001: METIAVFGSK LGFHLSLPSR NNLFLPPIFK FHGFPLTAFP DKPRQHVCLK TTTSASPTSD GQLSNRKFKK LPPSEWTDHF HSVPLDVSEM DALKREIETL
101: KPKVKNMFMS SQGTERILMI YLLVSLGLAY HFEDEIYDTL KESFTKIEEM MDKENDLYTV SIIFWVFRTY GHHISSDVFT RFKESNGDFK EILKGDARGI
201: LSLYEAAHLR TTKDYILNEA LSCTSSHLES LVAGGTCPSH LSMHIQNAFC LSQRWNMEML VVVEFIPFYE QENHDEMLLR FAKINFKLLQ LQYIQEVKIL
301: TNWYKEVDIA SKLPPYFRDR LVENHFLIQA VFPEPQVSRA RIMLTQYYTI LGIVDDTFDR YASLPEAEIL ADSLERWSPD HAMDKQPEYL KAVLNLMLDT
401: FEYFEKELRP EGKPYSVEAN IEEFKAVVKA NFEHAKWAHA AHLPSFEEYM EAAELEITVC AVLGGCFMSL GKMATKEAYE WLKSRPRLVK SLCVRCRLMN
501: DIYGLEEDMS RGLITNAVNC YMKQYGVTKQ DALRELHKMV ADTDNIINEE LLTTTCVSRL VLKTFTGLAQ SITVCYNGYE GFTFPEGKIK EYMTSVFVDQ
601: IRL

Best Arabidopsis Sequence Match ( AT4G20230.1 )
(BLAST)

001: MEATSVFRPK LGSQFSLPST TNLFPLRKLY GFPLTSFPGK PIKRIRLKAT NTLTFDDKER TRKFKKLPLS EWTHYFHSIP LDISEMDALK EEIDELKPKV
101: KNTFMSSQGS DSTKTKILMI YLFVSLGLAY HFEEEIYETL KEGFENIEKI MAGEEDLYTV SIIFWVFRRY GHYISSDVFQ RFKGSNGSFK ESLIGDAKGM
201: LSLYEAAHLA TTKDYILDEA LIFTSSHLET LVATGTCPPH LLARIRNALS ICQHWNFEVL VPLDFIPFYE QEKDHDEMLL KFAKLSFKYL KLIYLQDLKI
301: LTKWYKKLDF PSKFPPYFKD RCVENYFFVL PVFFEPQLSS ARMLLTKGFI LLGIQDDTFD RYASISEAES LGNSLKRWAP DHSMDKQPEY LKSVLKVILD
401: TFQEFEKELS PEGRSYSVKY TIEEFQASSK ANVELAKWAQ VSHVPSFEKY MEVGQMEITA CVTVAYILMS MGKTGTKEAF EWLKSRPKLV QSLCTKGRLM
501: NDIAGFEDDM SRGYVVNAVN CYMKQYGVTE KEAFKELRKM VVNTHKTLNE EFLTTTCVSH YVLRETMDFA RMIIVTYNGY EGFTRPDEGK IEEYMTSLFV
601: DHTLKML

Arabidopsis Description

Terpenoid cyclases/Protein prenyltransferases superfamily protein [Source:TAIR;Acc:AT4G20230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.