Factsheet for Solyc01g101190.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070310	Potato	cytosol	48.91	86.82
PGSC0003DMT400079785	Potato	cytosol	48.19	85.53
Solyc01g101220.1.1	Tomato	cytosol	24.82	81.55
VIT_18s0001g04200.t01	Wine grape	cytosol	11.59	53.78
Solyc01g105940.2.1	Tomato	cytosol	9.06	47.62
CDY14934	Canola	cytosol	1.27	43.75
Solyc01g105850.2.1	Tomato	cytosol	21.2	42.09
CDY18347	Canola	cytosol	12.14	40.36
Solyc10g005420.1.1	Tomato	cytosol	5.8	39.02
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	21.74	38.71
Bra027609.1-P	Field mustard	cytosol	19.38	37.15
CDY70719	Canola	cytosol	22.83	36.21
CDY27296	Canola	cytosol	12.68	35.9
AT5G48110.1	Thale cress	plastid	21.92	35.69
VIT_18s0001g04510.t01	Wine grape	plastid	19.75	35.62
Bra012513.1-P	Field mustard	cytosol	29.71	34.53
CDX82478	Canola	cytosol	33.33	34.26
Solyc02g079840.1.1	Tomato	cytosol	33.33	34.2
CDY68962	Canola	cytosol	31.16	34.13
CDX95274	Canola	cytosol	8.15	33.83
AT5G44630.1	Thale cress	cytosol	33.88	33.57
CDX98661	Canola	cytosol	33.88	33.57
CDX74453	Canola	cytosol	32.25	33.52
Bra020921.1-P	Field mustard	cytosol	24.46	33.33
CDY39124	Canola	cytoskeleton, cytosol, plastid	33.7	33.27
Bra001557.1-P	Field mustard	plastid	36.23	33.11
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	33.51	33.09
CDY69236	Canola	cytosol	28.99	33.06
AT3G14540.1	Thale cress	plastid	36.05	33.06
CDX75776	Canola	plastid	35.14	33.05
Bra028251.1-P	Field mustard	cytosol	33.33	33.03
AT3G14490.1	Thale cress	plastid	35.69	32.78
Solyc01g105960.2.1	Tomato	cytosol	21.01	32.77
CDX98470	Canola	plastid	34.42	32.53
Bra021566.1-P	Field mustard	plastid	29.89	32.48
CDY14933	Canola	cytosol	28.62	32.38
CDX82475	Canola	plastid	34.06	32.36
Bra039519.1-P	Field mustard	cytosol	32.61	32.32
Bra001555.1-P	Field mustard	plastid	35.51	32.24
AT3G32030.1	Thale cress	plastid	35.14	32.12
AT3G14520.1	Thale cress	plastid	35.14	32.07
Bra035927.1-P	Field mustard	mitochondrion, plastid	32.97	32.04
Bra012515.1-P	Field mustard	extracellular	14.31	31.98
CDX87217	Canola	plastid	34.78	31.95
Bra021560.1-P	Field mustard	plastid	34.78	31.89
CDY39119	Canola	plastid	34.6	31.73
CDY06577	Canola	cytosol	18.84	31.71
Bra002165.1-P	Field mustard	cytosol	31.88	31.65
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	34.78	31.58
CDY71184	Canola	cytosol	19.02	31.44
Bra012955.1-P	Field mustard	plastid	34.06	31.39
AT3G29410.1	Thale cress	plastid	34.24	31.34
CDY63249	Canola	cytosol	31.52	31.3
Bra021564.1-P	Field mustard	plastid	33.88	31.01
Os02t0458100-01	Rice	plastid	21.92	30.95
AT4G13300.1	Thale cress	cytosol	30.98	30.87
CDY23121	Canola	cytosol	21.2	30.79
Solyc05g026590.1.1	Tomato	cytosol	15.94	30.66
Solyc01g105870.2.1	Tomato	plastid	33.7	30.64
Bra027931.1-P	Field mustard	plastid	33.33	30.62
AT1G70080.1	Thale cress	mitochondrion	33.88	30.61
CDY02143	Canola	plastid	30.62	30.56
AT4G15870.1	Thale cress	plastid	32.97	30.43
CDY67821	Canola	cytosol	10.69	30.41
CDX82477	Canola	plastid	16.49	30.33
AT1G48820.1	Thale cress	mitochondrion, plastid	30.8	30.3
Solyc01g105920.2.1	Tomato	plastid	32.43	30.24
Solyc01g105880.2.1	Tomato	mitochondrion, plastid	32.25	30.17
CDX76471	Canola	plastid	32.61	29.85
AT1G33750.1	Thale cress	mitochondrion, plastid	32.43	29.68
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	20.47	29.66
Solyc01g105890.2.1	Tomato	plastid	32.61	29.56
Bra020953.1-P	Field mustard	plastid	32.43	29.34
AT4G20200.1	Thale cress	plastid	32.07	29.3
AT4G13280.2	Thale cress	cytosol	29.35	29.24
CDY09324	Canola	plastid	31.7	29.22
CDY41707	Canola	plastid	30.8	29.21
AT3G29190.1	Thale cress	plastid	31.7	29.12
Bra002714.1-P	Field mustard	plastid	30.98	29.03
CDY49723	Canola	plastid	31.34	29.03
Bra002968.1-P	Field mustard	plastid	20.29	29.02
Solyc01g105900.2.1	Tomato	plastid	28.08	28.97
AT3G29110.1	Thale cress	plastid	31.16	28.91
CDX76457	Canola	plastid	31.16	28.62
CDY13053	Canola	extracellular	28.62	28.57
CDY32356	Canola	plastid	32.07	28.55
AT1G48800.1	Thale cress	mitochondrion, plastid	30.98	28.36
AT2G23230.2	Thale cress	plastid	31.34	28.31
AT4G20210.1	Thale cress	plastid	30.62	28.17
CDX98659	Canola	plastid	31.52	28.16
AT1G66020.1	Thale cress	plastid	30.43	28.09
Solyc01g105860.2.1	Tomato	cytosol	11.05	27.98
AT4G20230.2	Thale cress	plastid	31.34	27.95
CDY42473	Canola	cytosol	28.44	27.94
CDX95273	Canola	plastid	21.2	27.92
VIT_18s0001g05430.t01	Wine grape	cytosol	24.28	27.8
CDY54565	Canola	plastid	28.8	27.65
CDY01639	Canola	cytosol	9.6	27.46
Solyc02g079890.1.1	Tomato	cytosol, plastid	27.17	27.42
KRG93110	Soybean	mitochondrion	14.13	26.35
Solyc03g007730.1.1	Tomato	cytosol	26.27	25.8
Solyc10g005390.2.1	Tomato	cytosol	26.09	25.58
Solyc01g105950.2.1	Tomato	extracellular	6.88	25.0
CDX75775	Canola	plastid	21.38	24.38
CDY09325	Canola	plastid	11.78	24.07
Solyc10g005410.2.1	Tomato	plastid	24.46	21.46
GSMUA_Achr6P24330_001	Banana	cytosol	5.25	20.57
GSMUA_Achr6P24340_001	Banana	cytosol	5.25	19.46

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ProteinID:AEP82772.1	ncoils:Coil	UniProt:G5CV44
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF25	SUPFAM:SSF48239	SUPFAM:SSF48576
EnsemblPlantsGene:Solyc01g101190.2	EnsemblPlants:Solyc01g101190.2.1	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00022CC6CA	SEG:seg	:	:	:

Description

Terpene synthase [Source:UniProtKB/TrEMBL;Acc:G5CV44]

Coordinates

chr1:+:91025763..91028021

Molecular Weight (calculated)

63648.6 Da

IEP (calculated)

4.696

GRAVY (calculated)

-0.285

Length

552 amino acids

Sequence
(BLAST)

001: MASAAALMSN CQDIVRPVAD FSPSLWGDRF HYFSLDNQVA EEYAQEIETL KEQTRSLLSD AACGTTLAEK LNLIDIVERL GLAYHFETQI EDMLDQIYKS
101: DPNFEAHDLN TLSLQFRILR QHGYNISPKI FCRFQDANGK FKESLSNDIK GLLNLYEASH VRTHGEDILE EALAFSTAHL ESAAPHLKSP LSKQVTHALE
201: QSLHKSIPRV ETRYFISIYE EEEQKNDVLL RFAKLDFNLL QMLHKQELSE VSRWWKDLDF VTTLPYARDR AVECYFWTMG VYAEPQYSQA RVMLAKTIAM
301: ISIVDDTFDA YGIVEELEVY TDAIQRWDIS QIDRLPDYMK ISYKALLDLY DDYETELSKD GRSDVVHYAK ERMKEIVRNY FVEAKWFIEG YMPPVSEYLS
401: NALATSTYYL LTTTSYLGVK SATKEDFEWL AKNPKILEAN VTLCRVIDDI ATYEVEKGRG QIATGIECYM RDYGVSTQVA MEKFQEMAEI AWKDVNEGIL
501: RPTPVSTEIL TRILNLARII DVTYKHNQDG YTHPEKVLKP HIIALLVDSV EI

Best Arabidopsis Sequence Match ( AT5G23960.2 )
(BLAST)

001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE YSICNIIPIP DSMKFIYNVT VEFYDKLDEE LEKEGRSGCG FHLKKSLQKT ANGYMQEAKW LKKDYIATFD EYKENAILSS
401: GYYALIAMTF VRMTDVAKLD AFEWLSSHPK IRVASEIISR FTDDISSYEF EHKREHVATG IDCYMQQFGV SKERAVEVMG NIVSDAWKDL NQELMRPHVF
501: PFPLLMRVLN LSRVIDVFYR YQDAYTNPKL LKEHIVSLLI ETIPI

Arabidopsis Description

TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.