Factsheet for Solyc10g005410.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005420.1.1	Tomato	cytosol	10.97	84.15
PGSC0003DMT400029266	Potato	cytosol	53.26	80.34
PGSC0003DMT400029265	Potato	cytosol	65.5	80.31
Solyc10g005390.2.1	Tomato	cytosol	69.48	77.62
Solyc05g026590.1.1	Tomato	cytosol	34.02	74.56
PGSC0003DMT400029275	Potato	cytosol	31.32	72.69
VIT_00s0572g00010.t01	Wine grape	cytosol	35.61	49.78
VIT_00s0271g00030.t01	Wine grape	cytosol	37.04	48.34
VIT_00s0271g00010.t01	Wine grape	cytosol	37.68	48.17
VIT_00s0372g00020.t01	Wine grape	cytosol	31.0	48.03
VIT_00s0266g00020.t01	Wine grape	cytosol	36.88	47.64
VIT_00s0266g00010.t01	Wine grape	cytosol	37.84	46.94
VIT_00s0572g00020.t01	Wine grape	cytosol	37.68	46.75
VIT_00s0372g00040.t01	Wine grape	cytosol	37.52	46.55
VIT_00s0847g00020.t01	Wine grape	cytosol	29.57	45.26
VIT_00s0372g00060.t01	Wine grape	cytosol	13.04	43.85
VIT_00s0266g00070.t01	Wine grape	cytosol	35.93	43.71
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	38.79	42.29
GSMUA_Achr2P03420_001	Banana	cytosol	32.11	41.91
Solyc01g105940.2.1	Tomato	cytosol	7.0	41.9
GSMUA_Achr9P21010_001	Banana	cytosol	31.48	41.34
VIT_00s0385g00020.t01	Wine grape	cytosol	33.23	41.14
KRH21637	Soybean	cytosol	33.7	39.7
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	30.68	39.39
EES04391	Sorghum	cytosol	26.07	39.33
TraesCS6A01G067300.1	Wheat	cytosol	29.09	38.94
KRH41974	Soybean	cytosol	17.96	38.83
Zm00001d053918_P001	Maize	cytosol	17.65	38.81
HORVU6Hr1G012090.1	Barley	cytosol	23.37	38.79
KRH49914	Soybean	plastid	35.29	38.74
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	39.11	38.14
AT1G61680.1	Thale cress	plastid	33.55	37.08
TraesCS6B01G091000.1	Wheat	cytosol	24.64	36.3
KRH49915	Soybean	plastid	33.86	36.22
TraesCS6A01G067500.1	Wheat	plastid	29.25	36.08
TraesCS6D01G065100.1	Wheat	plastid	31.48	36.0
TraesCS2A01G478100.1	Wheat	cytosol	19.55	35.76
TraesCS6B01G091500.1	Wheat	plastid	31.16	35.57
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	28.78	35.56
TraesCS6A01G067800.1	Wheat	plastid	30.68	35.15
TraesCS6D01G065200.1	Wheat	plastid	30.37	35.05
TraesCS6D01G048600.1	Wheat	plastid	30.21	34.86
TraesCSU01G116700.1	Wheat	plastid	30.37	34.73
TraesCS6B01G091100.1	Wheat	plastid	30.37	34.73
TraesCS6B01G091200.1	Wheat	cytosol	9.38	34.71
Zm00001d053916_P002	Maize	cytosol	24.48	34.61
TraesCSU01G116600.1	Wheat	plastid	30.21	34.55
TraesCS6B01G091300.1	Wheat	plastid	30.21	34.55
HORVU6Hr1G012170.1	Barley	plastid	30.05	34.43
TraesCS6B01G090500.1	Wheat	plastid	30.52	34.41
TraesCS6B01G091400.1	Wheat	plastid	30.68	34.34
TraesCS6B01G090800.1	Wheat	plastid	29.89	34.24
TraesCS6B01G092800.1	Wheat	plastid	29.89	34.24
EES04390	Sorghum	plastid	30.68	34.22
TraesCS6A01G067700.1	Wheat	plastid	29.89	34.18
TraesCS6A01G067600.1	Wheat	plastid	29.89	34.18
KXG29327	Sorghum	plastid	29.89	34.18
TraesCS7A01G261500.1	Wheat	cytosol	9.22	34.12
HORVU6Hr1G012110.1	Barley	plastid	32.43	33.83
TraesCS2B01G501400.1	Wheat	plastid	29.57	33.82
TraesCS6B01G092000.1	Wheat	plastid	29.09	33.7
TraesCSU01G116900.1	Wheat	plastid	30.05	33.69
TraesCS2D01G477300.1	Wheat	plastid	30.21	33.63
TraesCS6B01G091700.1	Wheat	plastid	29.09	33.46
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	28.93	33.39
HORVU6Hr1G012270.1	Barley	plastid	28.78	33.27
Solyc01g105850.2.1	Tomato	cytosol	14.63	33.09
Zm00001d015053_P001	Maize	plastid	30.05	32.53
EES04392	Sorghum	plastid	28.46	32.37
Zm00001d015054_P001	Maize	plastid	29.41	32.23
Os10t0489500-00	Rice	cytosol	25.91	31.9
TraesCS7D01G540300.1	Wheat	cytosol, plastid	27.5	31.8
Os02t0121700-01	Rice	plastid	28.78	30.42
EES04394	Sorghum	endoplasmic reticulum	28.46	30.08
Solyc02g079840.1.1	Tomato	cytosol	24.48	28.62
Solyc01g101220.1.1	Tomato	cytosol	7.63	28.57
Solyc01g105960.2.1	Tomato	cytosol	15.58	27.68
Solyc01g105880.2.1	Tomato	mitochondrion, plastid	25.44	27.12
Solyc01g105920.2.1	Tomato	plastid	25.44	27.03
Solyc01g105870.2.1	Tomato	plastid	24.96	25.86
Solyc01g105860.2.1	Tomato	cytosol	8.9	25.69
Solyc01g105890.2.1	Tomato	plastid	24.8	25.62
Solyc01g105900.2.1	Tomato	plastid	21.78	25.61
Solyc01g101190.2.1	Tomato	cytosol	21.46	24.46
Solyc03g007730.1.1	Tomato	cytosol	19.71	22.06
Solyc01g105950.2.1	Tomato	extracellular	5.09	21.05
Solyc02g079890.1.1	Tomato	cytosol, plastid	18.28	21.02

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ncoils:Coil	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:K4CX73	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0	SUPFAM:SSF48239	SUPFAM:SSF48576	EnsemblPlantsGene:Solyc10g005410.2
EnsemblPlants:Solyc10g005410.2.1	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000276C75E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:-:305976..311016

Molecular Weight (calculated)

72957.0 Da

IEP (calculated)

6.294

GRAVY (calculated)

-0.472

Length

629 amino acids

Sequence
(BLAST)

001: MANITKAFSP LPLYLCQIGS KRSSIKVSCR SSNRWNFQED LLKKTSYLQT SYNRDGFNST KFGLLVKDVK YALRTQINNN NNLVLVDTLQ RMGIEHHFQQ
101: EIQSILQKEY EQNTCFLKYQ NHHDISLCFR LLRQEGYHVS ADVFKKLKNN DDGTFGLNLN QDVNGLIGLY EASQLGVEGE YILDEIAKFS GDHLNACLAN
201: SDEARIIKET LKYPYHKSLS RWKNKSFINN FKGINGWGKN TLKELANMDY FITKEIHQHE LAQVFRWWKS LGLAEELKLL RDQPLKWYTW PMAMLTDPKM
301: SQERIELAKC ISFVYVIDDI FDVYGTIEEL TLFTQAVHRW ELSAMMDLPE YMRSLYKALY NTINSIGYNI YKIYGQNPTQ NLQNTWAHLC SAFLIEAKWF
401: ACGMVPTTDD SMHLQDISLM STSIAKILRL WDDLGSAKDE NQEGKDGSYV EYYMKENKDS SMELAREHVI KLIEDEWKQL NKEHFCLMSQ STRSFSKASL
501: NSARMVSLMY SYDDKQSLPI LQEYIKSMLD VKEAREYLSK KNEKLKTKQE RISECEPEVE NISIPLLEEE SIGDVNQLSN KAGKEFDRLP LCGTSDFAYE
601: DSSFKQEEFL PTSNSVVAAL NKILCIKGF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.