Factsheet for Zm00001d015054_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015053_P001	Maize	plastid	94.6	93.46
Zm00001d053918_P001	Maize	cytosol	37.28	74.83
Zm00001d053916_P002	Maize	cytosol	56.97	73.48
HORVU6Hr1G012090.1	Barley	cytosol	41.64	63.06
TraesCS6B01G091000.1	Wheat	cytosol	44.95	60.42
TraesCS7A01G261500.1	Wheat	cytosol	17.77	60.0
Os10t0489500-00	Rice	cytosol	53.14	59.69
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	52.79	59.53
TraesCS2A01G478100.1	Wheat	cytosol	35.37	59.01
TraesCS6A01G067300.1	Wheat	cytosol	47.91	58.51
TraesCS6B01G091200.1	Wheat	cytosol	17.25	58.24
TraesCS6A01G067500.1	Wheat	plastid	51.57	58.04
TraesCS6B01G090800.1	Wheat	plastid	55.4	57.92
TraesCSU01G116600.1	Wheat	plastid	55.05	57.45
TraesCS6A01G067700.1	Wheat	plastid	55.05	57.45
TraesCS6A01G067600.1	Wheat	plastid	55.05	57.45
TraesCSU01G116700.1	Wheat	plastid	54.88	57.27
TraesCS2B01G501400.1	Wheat	plastid	54.7	57.09
TraesCS6B01G091100.1	Wheat	plastid	54.7	57.09
HORVU6Hr1G012270.1	Barley	plastid	54.01	56.99
TraesCS6B01G091300.1	Wheat	plastid	54.53	56.91
TraesCS6B01G091500.1	Wheat	plastid	54.53	56.81
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	53.66	56.51
TraesCS6B01G092800.1	Wheat	plastid	54.01	56.47
TraesCS6D01G065100.1	Wheat	plastid	54.01	56.36
Os02t0121700-01	Rice	plastid	58.19	56.13
TraesCS6A01G067800.1	Wheat	plastid	53.66	56.1
TraesCS6D01G065200.1	Wheat	plastid	53.14	55.96
TraesCS6D01G048600.1	Wheat	plastid	52.96	55.78
TraesCS6B01G091400.1	Wheat	plastid	54.53	55.69
TraesCS2D01G477300.1	Wheat	plastid	54.7	55.58
HORVU6Hr1G012170.1	Barley	plastid	52.96	55.37
TraesCS7D01G540300.1	Wheat	cytosol, plastid	52.44	55.33
TraesCS6B01G092000.1	Wheat	plastid	52.26	55.25
TraesCS6B01G091700.1	Wheat	plastid	52.61	55.21
TraesCS6B01G090500.1	Wheat	plastid	52.96	54.48
TraesCSU01G116900.1	Wheat	plastid	52.44	53.65
HORVU6Hr1G012110.1	Barley	plastid	54.53	51.91
VIT_00s0372g00060.t01	Wine grape	cytosol	14.46	44.38
GSMUA_Achr2P03420_001	Banana	cytosol	36.76	43.78
GSMUA_Achr9P21010_001	Banana	cytosol	36.24	43.42
PGSC0003DMT400029275	Potato	cytosol	20.21	42.8
Solyc10g005420.1.1	Tomato	cytosol	6.1	42.68
VIT_00s0572g00010.t01	Wine grape	cytosol	32.75	41.78
VIT_00s0271g00030.t01	Wine grape	cytosol	34.67	41.29
PGSC0003DMT400029354	Potato	cytosol	20.56	41.26
VIT_00s0271g00010.t01	Wine grape	cytosol	35.19	41.06
VIT_00s0266g00020.t01	Wine grape	cytosol	34.67	40.86
PGSC0003DMT400029266	Potato	cytosol	29.62	40.77
VIT_00s0372g00020.t01	Wine grape	cytosol	28.75	40.64
VIT_00s0847g00020.t01	Wine grape	cytosol	28.92	40.39
VIT_00s0266g00010.t01	Wine grape	cytosol	35.19	39.84
VIT_00s0572g00020.t01	Wine grape	cytosol	35.02	39.65
VIT_00s0372g00040.t01	Wine grape	cytosol	35.02	39.65
VIT_00s0266g00070.t01	Wine grape	cytosol	33.97	37.72
PGSC0003DMT400029265	Potato	cytosol	33.45	37.43
VIT_00s0385g00020.t01	Wine grape	cytosol	33.1	37.4
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.01	36.33
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	36.06	35.88
Solyc10g005390.2.1	Tomato	cytosol	33.1	33.75
KRH49914	Soybean	plastid	33.45	33.51
Solyc05g026590.1.1	Tomato	cytosol	16.72	33.45
KRH21637	Soybean	cytosol	31.01	33.33
AT1G61680.1	Thale cress	plastid	32.75	33.04
KRH49915	Soybean	plastid	33.45	32.65
KRH41974	Soybean	cytosol	16.55	32.65
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	34.84	31.01
Solyc10g005410.2.1	Tomato	plastid	32.23	29.41
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	18.12	24.47
Zm00001d047440_P001	Maize	cytosol	12.54	24.24
Zm00001d004279_P001	Maize	mitochondrion	19.51	23.24
Zm00001d029523_P001	Maize	cytosol	18.99	21.54

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:732759	MapMan:9.1.4.2	ProteinID:AQK67959.1	EMBL:AY928082
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009611	GO:GO:0010333	GO:GO:0016829	GO:GO:0031347	GO:GO:0046872
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF0	UniProt:Q29VN1	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00006C66E6	EnsemblPlantsGene:Zm00001d015054	EnsemblPlants:Zm00001d015054_P001	EnsemblPlants:Zm00001d015054_T001
SEG:seg	:	:	:	:	:

Description

terpene synthase3 terpene synthase3

Coordinates

chr5:+:73448283..73451482

Molecular Weight (calculated)

64783.1 Da

IEP (calculated)

5.675

GRAVY (calculated)

-0.240

Length

574 amino acids

Sequence
(BLAST)

001: MYSLPGATMS AAPARVISSS SSSSFVEPLL LAAASSAAAN SHHQVRQRGH LVRTLAASSS SNTLLRSDFD LQEGLTTDVK RMLRQRQKKS GGGREMLVTI
101: DNLKRLCIDH FFEEEIEGAM ATGACTRLLH SDDLFDATLA FRLLREAGHD VSAKEDVLRR FIDGVSGDFK LSLNNDVRGL LGLHDMSHLD VGGEEAALLH
201: RAKEFSSSHL ASAVRYQDNP SLAEYVRQSL DHPYHLSLTQ YKARHHLRYL QSLPSSCRDA AVERLAVAEF QLNKSLHQRE MREIKRWWMD LGLAEEIPVV
301: RDQVMKWYMW SMAALQGSSF SRYRVYVVDD IFDLVGTLEE LSAFTEAVKM WDTAAADSLP SCMRSCYKAL HTVTNEIAEI AHKEHGSNPI NRLRKAWVVL
401: FDGFMVEARW LATDQVPTAE DYLRNGVVTS GVPLTFLHIF SMLGYDDPST EEEEEAIIDH MPSIISCPAK ILRLWDDMGS AEDEAQEGFD GSYRDFYLME
501: NPSRSPGEAE AHMRGLIARE WVELNRECFC RRTFPSDIAQ VCLNTARMVS VMYSYNKEQR LLVLEDYAAM MLVL

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.