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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G261500.1 Wheat cytosol 37.47 83.53
TraesCS6B01G091200.1 Wheat cytosol 36.41 81.18
TraesCS6B01G091000.1 Wheat cytosol 80.21 71.19
TraesCS6A01G067500.1 Wheat plastid 89.71 66.67
Zm00001d053918_P001 Maize cytosol 47.76 63.29
TraesCS6A01G067600.1 Wheat plastid 89.71 61.82
TraesCS6B01G090800.1 Wheat plastid 88.92 61.38
TraesCS6B01G091100.1 Wheat plastid 88.65 61.09
TraesCS6B01G091300.1 Wheat plastid 88.65 61.09
TraesCSU01G116700.1 Wheat plastid 88.65 61.09
TraesCSU01G116600.1 Wheat plastid 88.13 60.73
EES04391 Sorghum cytosol 66.23 60.19
HORVU6Hr1G012170.1 Barley plastid 80.21 55.37
Zm00001d053916_P002 Maize cytosol 64.38 54.83
HORVU6Hr1G088610.2 Barley cytosol, mitochondrion 70.98 52.85
HORVU6Hr1G012110.1 Barley plastid 80.47 50.58
Os10t0489500-00 Rice cytosol 67.55 50.1
KXG29327 Sorghum plastid 68.87 47.45
HORVU6Hr1G012270.1 Barley plastid 67.28 46.88
VIT_00s0372g00060.t01 Wine grape cytosol 22.69 45.99
EES04392 Sorghum plastid 67.02 45.93
EES04390 Sorghum plastid 66.23 44.5
Os02t0121700-01 Rice plastid 69.13 44.03
Solyc10g005420.1.1 Tomato cytosol 9.5 43.9
EES04394 Sorghum endoplasmic reticulum 66.49 42.35
Zm00001d015053_P001 Maize plastid 64.91 42.34
PGSC0003DMT400029354 Potato cytosol 31.93 42.31
PGSC0003DMT400029275 Potato cytosol 30.08 42.07
Zm00001d015054_P001 Maize plastid 63.06 41.64
VIT_00s0372g00020.t01 Wine grape cytosol 41.95 39.16
GSMUA_Achr2P03420_001 Banana cytosol 46.97 36.93
GSMUA_Achr9P21010_001 Banana cytosol 46.44 36.74
VIT_00s0572g00010.t01 Wine grape cytosol 43.54 36.67
VIT_00s0271g00030.t01 Wine grape cytosol 43.27 34.02
VIT_00s0266g00020.t01 Wine grape cytosol 42.22 32.85
VIT_00s0271g00010.t01 Wine grape cytosol 42.48 32.72
VIT_00s0572g00020.t01 Wine grape cytosol 43.27 32.35
VIT_00s0372g00040.t01 Wine grape cytosol 43.27 32.35
VIT_00s0266g00010.t01 Wine grape cytosol 43.27 32.35
VIT_00s0847g00020.t01 Wine grape cytosol 33.51 30.9
PGSC0003DMT400029266 Potato cytosol 32.98 29.98
PGSC0003DMT400029265 Potato cytosol 40.11 29.63
VIT_00s0266g00070.t01 Wine grape cytosol 40.37 29.59
VIT_00s0271g00060.t01 Wine grape cytosol, plastid 43.27 28.42
KRH21637 Soybean cytosol 39.05 27.72
Solyc10g005390.2.1 Tomato cytosol 39.58 26.64
VIT_00s0385g00020.t01 Wine grape cytosol 35.62 26.57
KRH49914 Soybean plastid 40.11 26.53
VIT_00s0385g00010.t01 Wine grape cytosol, plastid 33.25 25.71
VIT_00s0372g00070.t01 Wine grape cytosol, plasma membrane, plastid 43.54 25.58
KRH49915 Soybean plastid 37.99 24.49
AT1G61680.1 Thale cress plastid 36.68 24.43
Solyc10g005410.2.1 Tomato plastid 38.79 23.37
KRH41974 Soybean cytosol 15.3 19.93
Solyc05g026590.1.1 Tomato cytosol 15.04 19.86
HORVU7Hr1G111960.3 Barley cytosol, nucleus, peroxisome 27.7 17.77
HORVU2Hr1G003360.2 Barley plastid 26.12 17.22
HORVU2Hr1G003420.1 Barley plastid 25.59 17.11
HORVU2Hr1G003390.1 Barley plastid 26.12 16.67
HORVU7Hr1G122730.1 Barley cytosol 19.79 14.85
HORVU5Hr1G005860.1 Barley cytosol 20.32 13.7
HORVU5Hr1G004510.1 Barley cytosol 3.43 6.44
Protein Annotations
Gene3D:1.10.600.10Gene3D:1.50.10.130MapMan:9.1.4.2UniProt:A0A287TBR6GO:GO:0000287GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0010333GO:GO:0016829
EnsemblPlantsGene:HORVU6Hr1G012090EnsemblPlants:HORVU6Hr1G012090.1InterPro:IPR008949InterPro:IPR036965InterPro:Isoprenoid_synthase_dom_sfPFAM:PF03936
PANTHER:PTHR31225PANTHER:PTHR31225:SF0SUPFAM:SSF48239SUPFAM:SSF48576InterPro:Terpene_synth_N_sfInterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI000B463CD1::::
Description
No Description!
Coordinates
chrchr6H:-:22863810..22867383
Molecular Weight (calculated)
44148.3 Da
IEP (calculated)
6.280
GRAVY (calculated)
-0.245
Length
379 amino acids
Sequence
(BLAST)
001: MGEVSLYKAK EFSSKHLKFA IKYMEPNLAR YVIKSLDHPY HVSLMQYKAR HHLSYIQNLP TRHATIEKLA LAEFRVKKLQ HEREMQEVKR WWMDLGLAKE
101: IPAARDQVLK WYMWSMTILE GFSFSRYRVE ATKVISMVYI VDDIFDLVAT QEDLSLFNEA VKMWDLAAAE SLPSYMISCY KALYTITNDI ADMVRKEHGL
201: NSVNHLKKAW ATLFDGFMIE RKWLSTDQVP TSEDYLRNGV VTSGAPLLFI HLLFMLGHDL TEDNSGHILG VISCPAKIMR LWDDMGSAKD ELQEGLDGSY
301: KDLYQRENPH VDAEEHMMDM IAGEWESLNR EYFSRTKSTL PPSFIVASLN FARMVSVMYG YDNEQRLPVL EDYTRMLLF
Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.