Factsheet for HORVU2Hr1G003420.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G031300.1	Wheat	cytosol	41.27	86.99
TraesCS2B01G031400.1	Wheat	cytosol	41.09	86.62
TraesCS2B01G031500.1	Wheat	plastid	81.13	86.3
TraesCS2D01G023100.1	Wheat	plastid	85.19	85.49
TraesCS2B01G031000.1	Wheat	plastid	85.71	85.41
TraesCS2A01G022400.1	Wheat	plastid	85.36	85.36
TraesCS2B01G032300.2	Wheat	plastid	85.19	85.19
TraesCS2D01G023600.1	Wheat	plastid	85.36	84.76
HORVU2Hr1G003360.2	Barley	plastid	83.25	82.09
TraesCSU01G238200.1	Wheat	plastid	56.26	81.17
TraesCS2B01G031600.1	Wheat	mitochondrion	74.43	81.15
TraesCS2A01G022300.1	Wheat	plastid	79.89	76.13
HORVU2Hr1G003390.1	Barley	plastid	70.72	67.51
Zm00001d004279_P001	Maize	mitochondrion	45.86	53.94
OQU81208	Sorghum	mitochondrion, plastid	53.62	52.14
VIT_00s0392g00030.t01	Wine grape	cytosol	21.87	39.12
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	40.74	39.09
VIT_00s0361g00060.t01	Wine grape	cytosol	35.63	35.69
VIT_00s0392g00060.t01	Wine grape	cytosol	24.52	33.17
KRH55947	Soybean	cytosol	18.17	31.89
KRH22759	Soybean	cytosol	31.57	31.51
Solyc02g079890.1.1	Tomato	cytosol, plastid	29.81	30.9
KRH26550	Soybean	cytosol	22.57	30.48
Solyc03g007730.1.1	Tomato	cytosol	29.81	30.07
PGSC0003DMT400095524	Potato	cytosol	22.75	29.32
HORVU5Hr1G004510.1	Barley	cytosol	10.05	28.22
HORVU6Hr1G012170.1	Barley	plastid	25.4	26.23
HORVU7Hr1G122730.1	Barley	cytosol	23.28	26.14
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	23.1	25.74
HORVU6Hr1G012090.1	Barley	cytosol	17.11	25.59
HORVU6Hr1G012270.1	Barley	plastid	24.34	25.37
HORVU5Hr1G005860.1	Barley	cytosol	24.16	24.38
HORVU6Hr1G012110.1	Barley	plastid	25.75	24.21

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A287GX65	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	EnsemblPlantsGene:HORVU2Hr1G003420	EnsemblPlants:HORVU2Hr1G003420.1	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF9	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000B46D09E

Description

No Description!

Coordinates

chrchr2H:+:7580027..7583770

Molecular Weight (calculated)

63479.0 Da

IEP (calculated)

5.935

GRAVY (calculated)

-0.312

Length

567 amino acids

Sequence
(BLAST)

001: MAWQLLQAMA TTSTCFPTSS PATVRCSAAA RRSANYAPSS WDYDSLLQLS PNNGGQADEV DKLKACVRER LVAASRGDHQ TVKLGLVDTV QRLGIAYHFK
101: EEITGILSSV HHKPHGCSWD DGDVASAALR FRLLRDSGFP VYFPPESLEA VKHRSNDANG LLSLYEASYL AFGGEEALDE ARAFSKKALI KLLPSMDQYL
201: RRNVVRSLEL PLHRRSPRLE ARWFIDQYAK DESNSDPLLI RLATIDFNNV QSGHQEELAR LARWWKGTAL SEKLGFARDR LMECFHYANG IVWEPNDGAC
301: REVLAKVANL IVYLDDVYDV YGTLDELVLF TDAIGRWEET PSEMLPKYMQ ALYSVIYNTS TEVAENVLKQ HGCDTSYVLQ KAWRDMAESF LMEAKWHHGN
401: HKPTLCEYLD NGSISSSAPL LLQHAFPLLR LEEKLNAISL ATVGSYPKLV QSASLVLRLC NDSATHSAEL ERGDAPSSIA IHMSENNFSE QESRQAMEDL
501: TMEAWKSINE DAFKHCKFSG CFATSCVNLA RISHCVYQGG DGFGAPDGQK KTQIRELFLD SLISEKQ

Best Arabidopsis Sequence Match ( AT4G16740.1 )
(BLAST)

001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN

Arabidopsis Description

TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.