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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G031100.1 Wheat plastid 86.78 88.01
TraesCS2B01G030900.1 Wheat plastid 70.61 86.02
HORVU2Hr1G003420.1 Barley plastid 82.09 83.25
HORVU2Hr1G003390.1 Barley plastid 69.39 67.17
OQU81208 Sorghum mitochondrion, plastid 53.74 53.0
Zm00001d004279_P001 Maize mitochondrion 44.17 52.7
VIT_00s0392g00030.t01 Wine grape cytosol 21.74 39.43
HORVU7Hr1G111960.3 Barley cytosol, nucleus, peroxisome 40.52 39.42
VIT_00s0361g00060.t01 Wine grape cytosol 36.17 36.75
VIT_00s0392g00060.t01 Wine grape cytosol 24.87 34.13
KRH22759 Soybean cytosol 31.48 31.87
Solyc02g079890.1.1 Tomato cytosol, plastid 30.09 31.63
KRH55947 Soybean cytosol 17.74 31.58
Solyc03g007730.1.1 Tomato cytosol 30.26 30.96
KRH26550 Soybean cytosol 22.43 30.71
PGSC0003DMT400095524 Potato cytosol 23.48 30.68
HORVU7Hr1G122730.1 Barley cytosol 23.83 27.13
HORVU6Hr1G088610.2 Barley cytosol, mitochondrion 23.83 26.92
HORVU5Hr1G004510.1 Barley cytosol 9.39 26.73
HORVU6Hr1G012090.1 Barley cytosol 17.22 26.12
HORVU6Hr1G012270.1 Barley plastid 24.35 25.74
HORVU6Hr1G012170.1 Barley plastid 24.52 25.68
HORVU5Hr1G005860.1 Barley cytosol 24.0 24.56
HORVU6Hr1G012110.1 Barley plastid 25.57 24.38
Protein Annotations
Gene3D:1.10.600.10Gene3D:1.50.10.130MapMan:9.1.4.2UniProt:A0A287GX93GO:GO:0000287GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0010333GO:GO:0016829
GO:GO:0046872EnsemblPlantsGene:HORVU2Hr1G003360EnsemblPlants:HORVU2Hr1G003360.2InterPro:IPR008949InterPro:IPR036965InterPro:Isoprenoid_synthase_dom_sf
PFAM:PF01397PFAM:PF03936PANTHER:PTHR31225PANTHER:PTHR31225:SF9SUPFAM:SSF48239SUPFAM:SSF48576
InterPro:Terpene_cyclase_like_1_CInterPro:Terpene_synth_NInterPro:Terpene_synth_N_sfInterPro:Terpene_synthase_metal-bdInterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI000B472E90
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:7347962..7352987
Molecular Weight (calculated)
64552.1 Da
IEP (calculated)
6.066
GRAVY (calculated)
-0.382
Length
575 amino acids
Sequence
(BLAST)
001: MACQLQQTMA TTTTFSRTSS PSTVRCSAAA RRSANYAPNS WNYDSLLQLS PNNGGQADQV DKLKAGVRER LVAASGGGHQ AAKLGLVDTV QRLGIAYHFE
101: EEIDGILSSV YREPHRCSWD DGDVASAALR FRLLRDSGFP VFFPPESLED LKHRSDDVKG LLSLYEASYL AFGGEETLDK AREFSRKALR EHLSSMDHHL
201: RRSVVHALDL PLHWRSPRLE ARWFIDHYSR DENNSDPLLL GFAKVDFNNV QSVHQEELAR LARWWKGTAL SEKLGFARDR LMECFHCANG VVWGPNDGAC
301: REVLAKVANL IILLDDVYDV YGTLDELVLF TDAIGRWEER PSEMLPEYMQ ALYSVMYNTS AEVAENVLKQ DGCDARYFLQ KAWRDMAESF LMEAKWHHGN
401: HTPTLHEYLE NGSISASAPL LLQHAFPLLR LEEKLTSMSL VKVGSYPKLV QSASLVLRLC NDSATHSAEL ERGDAPSSIA IHMSENSSSE QESREAMEDL
501: TMATWKSINE DAFKHCQFST SFAKTCVNLA RTSHCVYQGG DGFGAPDGQK RRQIRELYLD PFMKALITEP KLGSA
Best Arabidopsis Sequence Match ( AT4G16740.1 )
(BLAST)
001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN
Arabidopsis Description
TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.