Factsheet for TraesCS2B01G030900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G031100.1	Wheat	plastid	94.7	78.84
HORVU2Hr1G003360.2	Barley	plastid	86.02	70.61
TraesCS2B01G031600.1	Wheat	mitochondrion	77.75	70.58
TraesCS2B01G031000.1	Wheat	plastid	84.53	70.12
TraesCS2B01G031500.1	Wheat	plastid	79.03	69.98
TraesCS2B01G032300.2	Wheat	plastid	83.26	69.31
TraesCS2B01G031300.1	Wheat	cytosol	39.19	68.77
TraesCS2B01G031400.1	Wheat	cytosol	38.98	68.4
Zm00001d004279_P001	Maize	mitochondrion	43.86	42.95
OQU81208	Sorghum	mitochondrion, plastid	51.69	41.85
VIT_00s0392g00030.t01	Wine grape	cytosol	21.19	31.55
TraesCS7B01G407200.1	Wheat	cytosol	38.77	31.34
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	11.86	30.43
VIT_00s0361g00060.t01	Wine grape	cytosol	35.17	29.33
VIT_00s0392g00060.t01	Wine grape	cytosol	25.85	29.12
PGSC0003DMT400095524	Potato	cytosol	26.27	28.18
KRH55947	Soybean	cytosol	17.58	25.7
KRH22759	Soybean	cytosol	29.66	24.65
Solyc02g079890.1.1	Tomato	cytosol, plastid	28.39	24.5
Solyc03g007730.1.1	Tomato	cytosol	28.81	24.2
TraesCS6B01G091100.1	Wheat	plastid	27.12	23.27
TraesCS6B01G091000.1	Wheat	cytosol	20.97	23.18
KRH26550	Soybean	cytosol	20.55	23.1
TraesCS2B01G501400.1	Wheat	plastid	26.91	23.09
TraesCS6B01G092000.1	Wheat	plastid	26.48	23.02
TraesCS6B01G091300.1	Wheat	plastid	26.48	22.73
TraesCS6B01G091500.1	Wheat	plastid	26.48	22.69
TraesCS6B01G090800.1	Wheat	plastid	26.27	22.59
TraesCS6B01G092800.1	Wheat	plastid	26.27	22.59
TraesCS6B01G091400.1	Wheat	plastid	26.27	22.06
TraesCS6B01G091700.1	Wheat	plastid	25.42	21.94
TraesCS6B01G008700.1	Wheat	cytosol	25.21	21.83
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	24.58	21.28
TraesCS6B01G090500.1	Wheat	plastid	25.0	21.15
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	24.36	20.87
TraesCS6B01G091200.1	Wheat	cytosol	6.57	18.24

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF9
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
EnsemblPlantsGene:TraesCS2B01G030900	EnsemblPlants:TraesCS2B01G030900.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:-:14210951..14214246

Molecular Weight (calculated)

53515.3 Da

IEP (calculated)

6.261

GRAVY (calculated)

-0.396

Length

472 amino acids

Sequence
(BLAST)

001: MALQLQQTMA TTSTCFRTSW PATVDKLKAD VRERLVAASR GGHQTAMLGL VDTVQRLGIA YHFEEEIAGI LRSVHQKPHR CSWDDGDVAS AALRFRLLRD
101: SGFPVFFPPG DVKGLLSLYE ASYLAFGGEE SLDKARAFSK KALREHLSSM DHHLRQSVVR ALDLPLHRRS PRLEARWFID PYSRDESNSD PLLIGFAKVD
201: FNNVQSVNQE ELARLASSLD DVYDVYGTLD ELALFTHAIG RWEERPSEML PEYMQVLYSV MYNTSAEVAE NVFKQHGCDA RNFLQEAWRD MAESFLVEAK
301: WHHGNQRPTL HEYLDNGSIS SSAPLLLQHV FPLLHVEEKL TPMLLAKVGS YPKLVQSASL VLCLCNDSAT HSAELDRGDA PSSISIHMSE NSSNEQESRE
401: SMEDLTMEAW KSINEDAFKH CRFSRYFAKT CVNLARISHC IYQGGDGFGA PDDQKKRQIR ELYFDSFMTK KH

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.