Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 99.05 | 73.32 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 39.86 | 52.68 |
| VIT_13s0067g00320.t01 | Wine grape | cytosol | 12.17 | 43.22 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 11.46 | 40.34 |
| VIT_08s0007g06860.t01 | Wine grape | plastid | 23.87 | 34.84 |
| PGSC0003DMT400095524 | Potato | cytosol | 35.32 | 33.64 |
| KRH22759 | Soybean | cytosol | 45.58 | 33.63 |
| VIT_13s0084g00010.t01 | Wine grape | cytosol | 44.15 | 33.58 |
| VIT_13s0067g03700.t01 | Wine grape | cytosol | 43.2 | 31.98 |
| VIT_13s0067g00370.t01 | Wine grape | plastid | 43.91 | 31.19 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 22.43 | 30.72 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 39.38 | 30.16 |
| KRH26550 | Soybean | cytosol | 30.07 | 30.0 |
| VIT_13s0019g00060.t01 | Wine grape | plastid | 42.0 | 29.63 |
| VIT_13s0067g03790.t01 | Wine grape | plastid | 41.77 | 29.51 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 21.72 | 29.35 |
| KRH55947 | Soybean | cytosol | 22.2 | 28.79 |
| VIT_13s0067g00130.t01 | Wine grape | plastid | 35.08 | 28.21 |
| VIT_00s0724g00010.t01 | Wine grape | cytosol | 28.64 | 28.1 |
| VIT_00s2271g00010.t01 | Wine grape | cytosol | 26.49 | 28.1 |
| VIT_12s0134g00020.t01 | Wine grape | plastid | 40.1 | 27.95 |
| Solyc03g007730.1.1 | Tomato | cytosol | 37.47 | 27.94 |
| VIT_12s0134g00030.t01 | Wine grape | mitochondrion | 38.42 | 27.81 |
| VIT_13s0067g03740.t01 | Wine grape | cytosol | 27.45 | 27.25 |
| VIT_13s0067g03770.t01 | Wine grape | cytosol | 22.43 | 27.09 |
| VIT_13s0067g00090.t01 | Wine grape | cytosol | 22.2 | 26.57 |
| VIT_12s0059g02710.t01 | Wine grape | plastid | 32.7 | 26.4 |
| Zm00001d004279_P001 | Maize | mitochondrion | 29.83 | 25.93 |
| VIT_13s0067g03830.t01 | Wine grape | plastid | 27.21 | 25.91 |
| TraesCS2B01G030900.1 | Wheat | plastid | 29.12 | 25.85 |
| VIT_12s0059g02720.t01 | Wine grape | plastid | 23.87 | 25.77 |
| HORVU2Hr1G003360.2 | Barley | plastid | 34.13 | 24.87 |
| TraesCS2D01G023100.1 | Wheat | plastid | 33.17 | 24.6 |
| TraesCS2A01G022400.1 | Wheat | plastid | 33.17 | 24.52 |
| HORVU2Hr1G003420.1 | Barley | plastid | 33.17 | 24.52 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 27.92 | 24.27 |
| TraesCS2D01G023600.1 | Wheat | plastid | 32.94 | 24.17 |
| TraesCS2B01G031100.1 | Wheat | plastid | 32.7 | 24.16 |
| TraesCS2B01G032300.2 | Wheat | plastid | 32.7 | 24.16 |
| TraesCS2B01G031000.1 | Wheat | plastid | 32.7 | 24.08 |
| OQU81208 | Sorghum | mitochondrion, plastid | 33.41 | 24.01 |
| Zm00001d018611_P001 | Maize | cytosol, extracellular, mitochondrion, peroxisome | 24.34 | 24.0 |
| HORVU2Hr1G003390.1 | Barley | plastid | 33.89 | 23.91 |
| TraesCS2A01G022300.1 | Wheat | plastid | 33.65 | 23.7 |
| TraesCS2B01G031600.1 | Wheat | mitochondrion | 29.36 | 23.65 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 27.68 | 23.58 |
| EER92447 | Sorghum | plastid | 34.13 | 23.52 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 27.21 | 23.41 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 28.16 | 22.82 |
| TraesCS2B01G031500.1 | Wheat | plastid | 28.88 | 22.7 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 27.45 | 22.68 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 27.45 | 22.68 |
| TraesCS2A01G022600.1 | Wheat | plastid | 31.03 | 22.53 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 27.21 | 22.49 |
| TraesCSU01G238200.1 | Wheat | plastid | 21.0 | 22.39 |
| TraesCS2D01G023800.1 | Wheat | plastid | 31.03 | 22.22 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 30.55 | 22.18 |
| TraesCS7B01G407200.1 | Wheat | cytosol | 30.79 | 22.09 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 23.39 | 21.78 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 21.0 | 21.67 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 25.78 | 21.26 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 20.53 | 20.92 |
| TraesCS7A01G500100.1 | Wheat | cytosol | 29.83 | 20.66 |
| HORVU7Hr1G111960.3 | Barley | cytosol, nucleus, peroxisome | 28.88 | 20.47 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 23.63 | 20.2 |
| TraesCS7D01G487700.2 | Wheat | cytosol | 21.0 | 20.18 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 23.15 | 20.12 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 27.68 | 17.98 |
| VIT_12s0134g00140.t01 | Wine grape | cytosol | 12.41 | 17.81 |
| VIT_12s0134g00090.t01 | Wine grape | cytosol | 12.17 | 17.35 |
| KXG34246 | Sorghum | cytosol | 28.88 | 16.83 |
| TraesCS2B01G031400.1 | Wheat | cytosol | 9.79 | 15.24 |
| TraesCS2B01G031300.1 | Wheat | cytosol | 9.79 | 15.24 |
| VIT_13s0067g00300.t01 | Wine grape | cytosol | 5.49 | 14.56 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 4.53 | 10.16 |
| VIT_12s0134g00040.t01 | Wine grape | mitochondrion | 4.3 | 8.04 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:50.4.2 | ProteinID:CCB61007 | ProteinID:CCB61007.1 | UniProt:F6I240 |
| EMBL:FN596527 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf |
| PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF9 | SUPFAM:SSF48239 | SUPFAM:SSF48576 |
| InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI000210A5B9 | ArrayExpress:VIT_00s0392g00060 |
| EnsemblPlantsGene:VIT_00s0392g00060 | EnsemblPlants:VIT_00s0392g00060.t01 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrUn:-:27236866..27239452
Molecular Weight (calculated)
47524.1 Da
IEP (calculated)
5.327
GRAVY (calculated)
-0.158
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSANHIQNS QEFLQCQAKS EGVGTISQRR SANYKPNIWK YDCVQSLTSE YMGEPYTRQV QQLKGEVRRV FVEVVEPLAK LEFIDSIKKL GLGNFFEEEI
101: REALDTIMSD KNNSPGIKAN LYAAALCFRL LRQHGYGVSQ DMFSGFMEEV GMFSKSTCTN VKGMIELFEA SHLALEGENI LDEAKAFSSG YLKEIISNLD
201: NNLAKQVVHS LERPLHWRVQ CFDIRWYIDF YEEEGVMNLD LLKLAKLNFN MVQAVHQKDL KHISSNAWIS SSVSLLSVHA IFFCVPHEAK EEMVDFLEKN
301: QELVYSSSLI LRLCNDLGTL EAELERGDAA SSVLCYMKEV NVSEEISRTH IRGMIVKTWK NMNGHCIASS PLLQPVVNII TNIARVAQWI YQYGDGLGIP
401: DRETKAQILS LLIEPLGIN
101: REALDTIMSD KNNSPGIKAN LYAAALCFRL LRQHGYGVSQ DMFSGFMEEV GMFSKSTCTN VKGMIELFEA SHLALEGENI LDEAKAFSSG YLKEIISNLD
201: NNLAKQVVHS LERPLHWRVQ CFDIRWYIDF YEEEGVMNLD LLKLAKLNFN MVQAVHQKDL KHISSNAWIS SSVSLLSVHA IFFCVPHEAK EEMVDFLEKN
301: QELVYSSSLI LRLCNDLGTL EAELERGDAA SSVLCYMKEV NVSEEISRTH IRGMIVKTWK NMNGHCIASS PLLQPVVNII TNIARVAQWI YQYGDGLGIP
401: DRETKAQILS LLIEPLGIN
001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESVRI LIILSM
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESVRI LIILSM
Arabidopsis Description
TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.