Factsheet for TraesCS7D01G487700.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G407200.1	Wheat	cytosol	89.45	66.78
TraesCS7A01G500100.1	Wheat	cytosol	89.91	64.79
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	84.17	62.1
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	41.28	42.35
KXG34246	Sorghum	cytosol	58.49	35.47
TraesCS2D01G023600.1	Wheat	plastid	44.27	33.8
TraesCS2D01G023100.1	Wheat	plastid	43.58	33.63
TraesCS2D01G023800.1	Wheat	plastid	40.6	30.26
VIT_00s0392g00030.t01	Wine grape	cytosol	20.87	28.71
VIT_00s0361g00060.t01	Wine grape	cytosol	34.86	26.86
KRH22759	Soybean	cytosol	32.8	25.18
Solyc02g079890.1.1	Tomato	cytosol, plastid	30.73	24.5
KRH26550	Soybean	cytosol	23.17	24.05
KRH55947	Soybean	cytosol	17.43	23.53
Solyc03g007730.1.1	Tomato	cytosol	28.9	22.42
PGSC0003DMT400095524	Potato	cytosol	22.48	22.27
TraesCS6D01G048600.1	Wheat	plastid	27.52	22.02
TraesCS6D01G065200.1	Wheat	plastid	27.52	22.02
TraesCS2D01G477300.1	Wheat	plastid	27.98	21.59
TraesCS6D01G065100.1	Wheat	plastid	27.06	21.45
TraesCS7D01G540300.1	Wheat	cytosol, plastid	26.61	21.32
VIT_00s0392g00060.t01	Wine grape	cytosol	20.18	21.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF18
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS7D01G487700	EnsemblPlants:TraesCS7D01G487700.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:+:597917292..597920029

Molecular Weight (calculated)

49674.4 Da

IEP (calculated)

4.802

GRAVY (calculated)

-0.208

Length

436 amino acids

Sequence
(BLAST)

001: MQQQAQQDHE VHHSKESSLQ SSLKQKVRRL LLEEEEELAT RLIIMDQLQS LGVAYHFEEE IRNILMSMHV HDAHHQLKHD LSSTALLFRM LRGYGISAST
101: DMLSAFRDEN GDFKAANPKD IDGFVALHEA SYLAFPGEAM LDEARAFAVK KLEQLMPSMF ISMERQIDLP LQWRVPRLQA IWSLQQHGYN DEKHLSMDPS
201: VLQLAVVDFN LVQAVHGAEL VEVTKWWKET GLGVKLPFAR DRLVECFFCA ACIAPEPPLA SCREVLAKVG SLIVHLDDVY DLYGTFDELA AFTDAVGSWD
301: DDALSTALPE YMKAMYSAIR STSTEAADRV TKGKGYDVLP LYKKAWHELC KAFLIEAKWQ HEGQMPCLEE YLENGWVTST GPLLLLHAFT MLQQQEQIDS
401: WLRNHDDGND MVYPKLVELC SMIFRLCNDC ATYEAE

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.