Factsheet for TraesCS7B01G407200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G487700.2	Wheat	cytosol	66.78	89.45
TraesCS7A01G500100.1	Wheat	cytosol	87.84	84.79
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	82.88	81.9
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	39.21	53.88
TraesCS2B01G031300.1	Wheat	cytosol	22.95	49.81
TraesCS2B01G031400.1	Wheat	cytosol	22.95	49.81
KXG34246	Sorghum	cytosol	52.74	42.84
TraesCS2B01G031600.1	Wheat	mitochondrion	37.33	41.92
TraesCS2B01G031000.1	Wheat	plastid	39.73	40.77
TraesCS2B01G031100.1	Wheat	plastid	39.38	40.56
TraesCS2B01G032300.2	Wheat	plastid	39.38	40.56
TraesCS2B01G031500.1	Wheat	plastid	36.82	40.34
TraesCS2B01G030900.1	Wheat	plastid	31.34	38.77
VIT_00s0392g00030.t01	Wine grape	cytosol	20.38	37.54
VIT_00s0361g00060.t01	Wine grape	cytosol	32.53	33.57
KRH22759	Soybean	cytosol	30.14	30.99
KRH26550	Soybean	cytosol	22.26	30.95
VIT_00s0392g00060.t01	Wine grape	cytosol	22.09	30.79
Solyc02g079890.1.1	Tomato	cytosol, plastid	28.42	30.35
KRH55947	Soybean	cytosol	16.61	30.03
Solyc03g007730.1.1	Tomato	cytosol	27.57	28.65
PGSC0003DMT400095524	Potato	cytosol	21.58	28.64
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	8.9	28.26
TraesCS6B01G091000.1	Wheat	cytosol	20.21	27.63
TraesCS6B01G091100.1	Wheat	plastid	24.83	26.36
TraesCS2B01G501400.1	Wheat	plastid	24.66	26.18
TraesCS6B01G091200.1	Wheat	cytosol	7.53	25.88
TraesCS6B01G090800.1	Wheat	plastid	24.32	25.87
TraesCS6B01G091300.1	Wheat	plastid	24.32	25.82
TraesCS6B01G092000.1	Wheat	plastid	23.63	25.41
TraesCS6B01G092800.1	Wheat	plastid	23.8	25.32
TraesCS6B01G091500.1	Wheat	plastid	23.63	25.05
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	23.63	25.05
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	23.29	24.95
TraesCS6B01G090500.1	Wheat	plastid	23.8	24.91
TraesCS6B01G091700.1	Wheat	plastid	22.95	24.5
TraesCS6B01G008700.1	Wheat	cytosol	22.6	24.22
TraesCS6B01G091400.1	Wheat	plastid	23.29	24.2

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF18
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS7B01G407200	EnsemblPlants:TraesCS7B01G407200.1	TIGR:cd00684	SEG:seg	:

Description

No Description!

Coordinates

chr7B:-:676248807..676251852

Molecular Weight (calculated)

65910.4 Da

IEP (calculated)

4.701

GRAVY (calculated)

-0.274

Length

584 amino acids

Sequence
(BLAST)

001: MASSAHATMY ADRFPSAELQ QRPADYQLKT WDYDSICSMK QQAQQDHEHS KQSSLQSSLK QKVRRLLLEE EEELATRLII MDQLQSLGVA YHFEEEIRNI
101: LMSMHVHDAH LQLKHDLSST ALLFRMLRGH GISASTDMLI AFRDENGDFK AENPKDIDAF VALHEASYLA FPGEAMLDEA RAFAVKKLEE LMPSMSTFMG
201: PASQTEIQGD LPLHWRVPRL QATWSLKQHG YNDERNLSMD PSILQLAAVD FNLVQAVHGA ELVEVTNWWK ETRLGEKLPF ARDRLVECFF CAASIAPEPC
301: LAGCREVLAK VGSLIVHLDD VYDLYGTLDE LAAFTDVVGR WCEWDDDALL PLPEYMKAMY SAIRSTSMEA ADRVMNEQGY DALPLYKKAW HELCKAFLIE
401: AKWQHEGGMP SLEEYLENGW VTSTGPLLLL HAFTMLQQQE QTDSWLRNHE DGDDMVTAYP KLVELCSMIF RLCNDCATHE AESERGEAAS AITCRMGGAT
501: SKEEARAAVA DAIAETWKKV NREVALSSST GTWSAANRVC VNLVRTIQCI YQDGDSITSP KDSRKRLVMD MLFTPLDLDI CGAW

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.