Factsheet for HORVU7Hr1G111960.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G487700.2	Wheat	cytosol	62.1	84.17
TraesCS7B01G407200.1	Wheat	cytosol	81.9	82.88
TraesCS7A01G500100.1	Wheat	cytosol	82.57	80.66
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	37.73	52.47
KXG34246	Sorghum	cytosol	51.44	42.28
HORVU2Hr1G003420.1	Barley	plastid	39.09	40.74
HORVU2Hr1G003360.2	Barley	plastid	39.42	40.52
HORVU2Hr1G003390.1	Barley	plastid	40.1	39.9
VIT_00s0392g00030.t01	Wine grape	cytosol	19.63	36.59
VIT_00s0361g00060.t01	Wine grape	cytosol	30.96	32.33
KRH22759	Soybean	cytosol	30.29	31.51
Solyc02g079890.1.1	Tomato	cytosol, plastid	28.76	31.08
KRH26550	Soybean	cytosol	21.83	30.71
VIT_00s0392g00060.t01	Wine grape	cytosol	20.47	28.88
Solyc03g007730.1.1	Tomato	cytosol	27.41	28.83
KRH55947	Soybean	cytosol	15.74	28.79
PGSC0003DMT400095524	Potato	cytosol	21.32	28.64
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	24.37	28.29
HORVU6Hr1G012090.1	Barley	cytosol	17.77	27.7
HORVU6Hr1G012170.1	Barley	plastid	25.21	27.14
HORVU6Hr1G012270.1	Barley	plastid	24.53	26.65
HORVU7Hr1G122730.1	Barley	cytosol	22.5	26.34
HORVU5Hr1G005860.1	Barley	cytosol	24.03	25.27
HORVU5Hr1G004510.1	Barley	cytosol	8.12	23.76
HORVU6Hr1G012110.1	Barley	plastid	24.2	23.71

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872
EnsemblPlantsGene:HORVU7Hr1G111960	EnsemblPlants:HORVU7Hr1G111960.3	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M0VND3
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF18	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00029626A7
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:634924426..634928405

Molecular Weight (calculated)

65887.0 Da

IEP (calculated)

5.466

GRAVY (calculated)

-0.160

Length

591 amino acids

Sequence
(BLAST)

001: MASAADATMY ADRFPPAELH RRPVDYQPKT WDYDSICSLQ EQAHKDDKHS KQSSLQTSLK RRVRQLFLEE EEELATRLMI MDQLQSLGVA YHFEDEIKSI
101: LMSMHVYDAY LQLKHDLSST ALLFRLLRGY GIPASTVDML SSFRDANGDF KAATPKDIDA FVALHEATYL AFPGEAVLDE ARAFAIKTLQ ELMPSMSISV
201: VPASQTETQG DLPLHWRVPR LQATCSLKQH GYNDKSLSCR KIDPSILHLA AVDFNLVQAV HGAELLKVTK WWKETGLGKK LPFARDRLVE CFFCAACIAP
301: EPSLAGCREV LAKVGSLIVH LDDVYDLYGT VDELAAFTDA IGSWCDEDAL SLVAALPEYM KAMYCAIRST SSGAADRVMK EQGYDVLPLY KKAWHELCKA
401: FLIEAKWQHD GQMPCLEEYL ENGWVTSTGP LLLLHAFTML QDQEQMDSWL RNHQDGDDMV MAYPKLVELC SMIFRLCNDC ATHEAESGRG EAASAITCHM
501: RGGASKEEAH AAVVDAIADT WKKVNMEAAL CSRTGTGTAA NRVCVNLART ILCIYQDGDG ITSPKDSRKR MVKDMLFTPV DLDICVAHGR A

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.