Factsheet for Zm00001d018611_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, extracellular, cytosol

Predictor Summary:

plastid 1
extracellular 1
mitochondrion 2
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34246	Sorghum	cytosol	70.82	41.86
TraesCS7D01G487700.2	Wheat	cytosol	42.35	41.28
TraesCS7B01G407200.1	Wheat	cytosol	53.88	39.21
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	52.47	37.73
TraesCS7A01G500100.1	Wheat	cytosol	53.65	37.69
Zm00001d004279_P001	Maize	mitochondrion	36.94	32.57
VIT_00s0392g00030.t01	Wine grape	cytosol	22.59	30.28
KRH55947	Soybean	cytosol	18.82	24.77
KRH26550	Soybean	cytosol	24.47	24.76
VIT_00s0392g00060.t01	Wine grape	cytosol	24.0	24.34
VIT_00s0361g00060.t01	Wine grape	cytosol	32.0	24.03
KRH22759	Soybean	cytosol	30.12	22.54
Solyc02g079890.1.1	Tomato	cytosol, plastid	28.24	21.94
PGSC0003DMT400095524	Potato	cytosol	22.59	21.82
Zm00001d053916_P002	Maize	cytosol	21.88	20.9
Solyc03g007730.1.1	Tomato	cytosol	27.53	20.82
Zm00001d029523_P001	Maize	cytosol	24.47	20.55
Zm00001d053918_P001	Maize	cytosol	13.41	19.93
Zm00001d047440_P001	Maize	cytosol	12.94	18.52
Zm00001d015054_P001	Maize	plastid	24.47	18.12
Zm00001d015053_P001	Maize	plastid	24.71	18.07

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A1D6HQM5	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	ProteinID:ONM50868.1	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF18	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0008423D6D	EnsemblPlantsGene:Zm00001d018611	EnsemblPlants:Zm00001d018611_P001	EnsemblPlants:Zm00001d018611_T001
SEG:seg	:	:	:	:	:

Description

18-cineole synthase 1 chloroplastic

Coordinates

chr7:-:845376..846882

Molecular Weight (calculated)

47054.1 Da

IEP (calculated)

6.111

GRAVY (calculated)

-0.160

Length

425 amino acids

Sequence
(BLAST)

001: MQQQQPLDLH SAALLFRMLR GLGIPASTDM LMSALLREES GKLAADSDGL LALYQASYLA FPGETELDQA RAFAVAKLAG RRDDGSADSC PSSTHLSLPL
101: HWTAPRLQAM WSLKDQVERG RPDHQDQAII LQLAQLDFNL VQALHRRELA EVTRWWKETS RLGEHAFARD RVVECFFCAA CIAPEPRLAE CREVLAKAGA
201: LIVHLDDIYD VYGTPDELRA FTDAVASWEH SATRTTHSPR RSWWRRSGSS RDSGHMPSFA QYVSNGWVTS TGPLLLLHAL PAAAAIPRPP IITTAACTVD
301: YYPRLVELSS TIFRLCNDCA SHEAESERGD APSSIACCMA EPWCAGGEEQ ARAAVQGVIA ETWKLLNREV CCSCAEHEES LTTMANLCLN LARVIHCIYQ
401: DGDGITTPTH RMKRMVKDLL FNPIL

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.