Factsheet for Solyc03g007730.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400095524	Potato	cytosol	71.35	91.14
Solyc02g079890.1.1	Tomato	cytosol, plastid	66.55	68.37
VIT_00s0392g00030.t01	Wine grape	cytosol	26.16	46.37
Solyc01g105940.2.1	Tomato	cytosol	8.01	42.86
VIT_00s0361g00060.t01	Wine grape	cytosol	40.93	40.64
KRH22759	Soybean	cytosol	40.04	39.61
KRH55947	Soybean	cytosol	22.6	39.32
Solyc01g105860.2.1	Tomato	cytosol	14.77	38.07
VIT_00s0392g00060.t01	Wine grape	cytosol	27.94	37.47
KRH26550	Soybean	cytosol	27.58	36.9
Solyc02g079840.1.1	Tomato	cytosol	34.34	35.87
Solyc01g105950.2.1	Tomato	extracellular	9.61	35.53
Solyc01g105850.2.1	Tomato	cytosol	16.73	33.81
Solyc01g105920.2.1	Tomato	plastid	35.05	33.28
Solyc01g105960.2.1	Tomato	cytosol	20.46	32.49
TraesCS2B01G031300.1	Wheat	cytosol	15.3	31.97
TraesCS2B01G031400.1	Wheat	cytosol	15.3	31.97
Solyc01g105900.2.1	Tomato	plastid	30.43	31.96
Solyc01g105880.2.1	Tomato	mitochondrion, plastid	33.27	31.69
TraesCS2B01G031600.1	Wheat	mitochondrion	28.83	31.15
Solyc01g105890.2.1	Tomato	plastid	33.27	30.71
Zm00001d004279_P001	Maize	mitochondrion	26.16	30.5
HORVU2Hr1G003390.1	Barley	plastid	32.03	30.3
HORVU2Hr1G003360.2	Barley	plastid	30.96	30.26
TraesCS2D01G023100.1	Wheat	plastid	30.25	30.09
TraesCS2A01G022600.1	Wheat	plastid	30.78	29.98
TraesCS2B01G031000.1	Wheat	plastid	30.25	29.88
HORVU2Hr1G003420.1	Barley	plastid	30.07	29.81
TraesCS2D01G023600.1	Wheat	plastid	30.25	29.77
TraesCS2B01G032300.2	Wheat	plastid	29.89	29.63
Solyc01g105870.2.1	Tomato	plastid	31.85	29.49
TraesCS2A01G022400.1	Wheat	plastid	29.72	29.45
TraesCS2B01G031100.1	Wheat	plastid	29.72	29.45
Solyc10g005420.1.1	Tomato	cytosol	4.27	29.27
TraesCS2A01G022300.1	Wheat	plastid	30.96	29.24
TraesCS2D01G023800.1	Wheat	plastid	30.25	29.06
TraesCS7D01G487700.2	Wheat	cytosol	22.42	28.9
TraesCS2B01G031500.1	Wheat	plastid	27.4	28.89
TraesCS2B01G030900.1	Wheat	plastid	24.2	28.81
OQU81208	Sorghum	mitochondrion, plastid	29.72	28.64
EER92447	Sorghum	plastid	30.61	28.29
TraesCS7B01G407200.1	Wheat	cytosol	28.65	27.57
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	20.82	27.53
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	28.83	27.41
TraesCS7A01G500100.1	Wheat	cytosol	28.47	26.45
Solyc01g101190.2.1	Tomato	cytosol	25.8	26.27
TraesCSU01G238200.1	Wheat	plastid	17.79	25.45
Solyc10g005390.2.1	Tomato	cytosol	25.44	25.4
Solyc01g101220.1.1	Tomato	cytosol	7.47	25.0
Solyc05g026590.1.1	Tomato	cytosol	12.63	24.74
KXG34246	Sorghum	cytosol	26.16	20.45
Solyc10g005410.2.1	Tomato	plastid	22.06	19.71

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:K4BEJ5	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF9	SUPFAM:SSF48239	SUPFAM:SSF48576	EnsemblPlantsGene:Solyc03g007730.1	EnsemblPlants:Solyc03g007730.1.1
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000276831D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:2259428..2263045

Molecular Weight (calculated)

65103.8 Da

IEP (calculated)

5.386

GRAVY (calculated)

-0.315

Length

562 amino acids

Sequence
(BLAST)

001: MACRCILSVI PTMQTQKIHT LSIKNQIQPE TTISSYKPNI WKYDDLLSLT TQYSKRKYQI EAEKLKEEVI SCTFSKSDTP VVLLELVDEI DKFGLTDYFD
101: VETKAALEKT ITYMKCSNTK DNKDIYATAL CFRLLRQHGY YASQDMLKEL FDRKKMSDTK TLLELLEGSY LGMDGENLLN DIRLLTTNNL MNTSFNKENL
201: SNYFPLAWRV RWYDVRGHIT MFTQQGNNNN NTNQVLLNLA KLNFNIIQAT HLKDLKDVIR WWRDLDIVED LFFTRDRIVE CFYFAGGIGS KPQQGSIRKW
301: VTKVFQLVLI IDDVFDIYGS LADAQQFTHA INKWDPNEVK CLPECIQICF RALYDTVEEI YAEIDDQQKG CQHSAFPSLK QGWLNFCKAM LLEAKWYNEG
401: HIPTLEEYLN NGWISSTVPL LSDYVIYGLT NNKITNESLD SSNNFQEIIY HTSVIFRLCN DQGTSAAELE RGDVASSIIC YMQQENVSED VAREHIESII
501: LDSWKKINYH FNTLSMSHRE IAKHVINIAR MGHVMYQFGD GFGVQDGKTR DQILINLMEP IT

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.