Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G031300.1 | Wheat | cytosol | 98.88 | 98.88 |
| TraesCS2B01G031500.1 | Wheat | plastid | 96.65 | 48.78 |
| TraesCS2B01G031000.1 | Wheat | plastid | 97.4 | 46.05 |
| TraesCS2B01G031600.1 | Wheat | mitochondrion | 88.85 | 45.96 |
| TraesCS2D01G023100.1 | Wheat | plastid | 93.31 | 44.42 |
| TraesCS2B01G032300.2 | Wheat | plastid | 92.57 | 43.92 |
| TraesCS2B01G031100.1 | Wheat | plastid | 86.99 | 41.27 |
| HORVU2Hr1G003420.1 | Barley | plastid | 86.62 | 41.09 |
| TraesCS2B01G030900.1 | Wheat | plastid | 68.4 | 38.98 |
| Zm00001d004279_P001 | Maize | mitochondrion | 50.93 | 28.42 |
| OQU81208 | Sorghum | mitochondrion, plastid | 60.59 | 27.96 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 31.6 | 26.81 |
| TraesCS7B01G407200.1 | Wheat | cytosol | 49.81 | 22.95 |
| KRH55947 | Soybean | cytosol | 22.3 | 18.58 |
| TraesCS6B01G091200.1 | Wheat | cytosol | 11.52 | 18.24 |
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 38.29 | 18.2 |
| KRH26550 | Soybean | cytosol | 26.39 | 16.9 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 33.46 | 16.45 |
| KRH22759 | Soybean | cytosol | 33.09 | 15.67 |
| Solyc03g007730.1.1 | Tomato | cytosol | 31.97 | 15.3 |
| TraesCS6B01G091000.1 | Wheat | cytosol | 23.79 | 14.99 |
| TraesCS6B01G092000.1 | Wheat | plastid | 29.37 | 14.55 |
| TraesCS2B01G501400.1 | Wheat | plastid | 28.25 | 13.82 |
| TraesCS6B01G091100.1 | Wheat | plastid | 27.51 | 13.45 |
| TraesCS6B01G091300.1 | Wheat | plastid | 27.51 | 13.45 |
| TraesCS6B01G090500.1 | Wheat | plastid | 27.88 | 13.44 |
| TraesCS6B01G413300.1 | Wheat | cytosol, endoplasmic reticulum | 27.14 | 13.39 |
| TraesCS6B01G090800.1 | Wheat | plastid | 27.14 | 13.3 |
| TraesCS6B01G092800.1 | Wheat | plastid | 27.14 | 13.3 |
| TraesCS6B01G091700.1 | Wheat | plastid | 26.77 | 13.16 |
| TraesCS6B01G091500.1 | Wheat | plastid | 26.77 | 13.07 |
| TraesCS6B01G091400.1 | Wheat | plastid | 26.77 | 12.81 |
| PGSC0003DMT400095524 | Potato | cytosol | 20.82 | 12.73 |
| TraesCS5B01G018200.1 | Wheat | cytosol, mitochondrion, plastid | 25.65 | 12.52 |
| TraesCS6B01G008700.1 | Wheat | cytosol | 24.91 | 12.29 |
| TraesCS2B01G064700.1 | Wheat | cytosol, extracellular | 7.06 | 10.33 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 15.24 | 9.79 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF9 | SUPFAM:SSF48239 |
| SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | EnsemblPlantsGene:TraesCS2B01G031400 |
| EnsemblPlants:TraesCS2B01G031400.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:14459059..14460254
Molecular Weight (calculated)
31060.1 Da
IEP (calculated)
6.445
GRAVY (calculated)
-0.336
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYHLRRAVV RSLDLPLHRR SPRLEARWFI DHYARDESNS DPLLVRFATT DFNNVQSLHQ EELARLARWW KGTALSEKLG FARDRLMECF HYANGIVWEP
101: NNGACREVLA KVANLIVHLD DVYDVYGTLD ELVLFTDAIG RWEESPSERL PEYMQALYSM MYNTSAEVAE NVLEQHGCDA RHVLRKAWRD MAESFLVEAK
201: WHHGNHRPTL REYLDNGSIS SSAPLLLQHA FPLLHMEEKL TPMSLAKVGS YPKLVESGSL VLRLCNPLC
101: NNGACREVLA KVANLIVHLD DVYDVYGTLD ELVLFTDAIG RWEESPSERL PEYMQALYSM MYNTSAEVAE NVLEQHGCDA RHVLRKAWRD MAESFLVEAK
201: WHHGNHRPTL REYLDNGSIS SSAPLLLQHA FPLLHMEEKL TPMSLAKVGS YPKLVESGSL VLRLCNPLC
001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D
Arabidopsis Description
TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.