Factsheet for TraesCS6B01G092000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G012270.1	Barley	plastid	93.92	93.75
TraesCS7D01G540300.1	Wheat	cytosol, plastid	75.51	75.37
TraesCS6B01G091200.1	Wheat	cytosol	21.55	68.82
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	67.59	67.34
TraesCS6B01G091000.1	Wheat	cytosol	52.85	67.21
TraesCS6B01G091500.1	Wheat	plastid	65.93	64.97
TraesCS6B01G092800.1	Wheat	plastid	65.56	64.85
EES04391	Sorghum	cytosol	49.54	64.51
TraesCS6B01G090800.1	Wheat	plastid	64.46	63.75
TraesCS2B01G501400.1	Wheat	plastid	64.27	63.45
TraesCS6B01G091300.1	Wheat	plastid	64.27	63.45
TraesCS6B01G091100.1	Wheat	plastid	64.27	63.45
TraesCS6B01G091700.1	Wheat	plastid	63.72	63.25
TraesCS6B01G091400.1	Wheat	plastid	65.38	63.17
TraesCS6B01G090500.1	Wheat	plastid	64.46	62.72
Os10t0489500-00	Rice	cytosol	57.64	61.25
KXG29327	Sorghum	plastid	59.85	59.09
Zm00001d053918_P001	Maize	cytosol	30.94	58.74
Zm00001d053916_P002	Maize	cytosol	48.07	58.65
EES04390	Sorghum	plastid	59.67	57.45
Os02t0121700-01	Rice	plastid	62.25	56.81
EES04392	Sorghum	plastid	57.83	56.78
EES04394	Sorghum	endoplasmic reticulum	59.12	53.95
Zm00001d015053_P001	Maize	plastid	56.91	53.18
Zm00001d015054_P001	Maize	plastid	55.25	52.26
VIT_00s0372g00060.t01	Wine grape	cytosol	15.65	45.45
Solyc10g005420.1.1	Tomato	cytosol	6.63	43.9
PGSC0003DMT400029275	Potato	cytosol	21.73	43.54
GSMUA_Achr2P03420_001	Banana	cytosol	38.49	43.36
GSMUA_Achr9P21010_001	Banana	cytosol	37.94	43.01
PGSC0003DMT400029354	Potato	cytosol	22.47	42.66
VIT_00s0372g00020.t01	Wine grape	cytosol	31.68	42.36
VIT_00s0271g00030.t01	Wine grape	cytosol	37.57	42.32
VIT_00s0572g00010.t01	Wine grape	cytosol	34.99	42.22
VIT_00s0266g00020.t01	Wine grape	cytosol	37.57	41.89
VIT_00s0271g00010.t01	Wine grape	cytosol	37.94	41.87
VIT_00s0847g00020.t01	Wine grape	cytosol	30.2	39.9
VIT_00s0266g00010.t01	Wine grape	cytosol	37.02	39.65
VIT_00s0572g00020.t01	Wine grape	cytosol	37.02	39.65
VIT_00s0372g00040.t01	Wine grape	cytosol	37.02	39.65
PGSC0003DMT400029266	Potato	cytosol	29.83	38.85
VIT_00s0266g00070.t01	Wine grape	cytosol	35.91	37.72
PGSC0003DMT400029265	Potato	cytosol	34.99	37.04
VIT_00s0385g00020.t01	Wine grape	cytosol	34.62	37.01
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	39.04	36.74
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.86	35.31
KRH21637	Soybean	cytosol	33.52	34.08
Solyc10g005390.2.1	Tomato	cytosol	34.62	33.39
KRH49914	Soybean	plastid	34.81	32.98
Solyc05g026590.1.1	Tomato	cytosol	16.76	31.71
KRH41974	Soybean	cytosol	16.94	31.62
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	37.38	31.47
KRH49915	Soybean	plastid	33.15	30.61
TraesCS2B01G031400.1	Wheat	cytosol	14.55	29.37
TraesCS2B01G031300.1	Wheat	cytosol	14.55	29.37
AT1G61680.1	Thale cress	plastid	30.76	29.35
Solyc10g005410.2.1	Tomato	plastid	33.7	29.09
TraesCS2B01G030900.1	Wheat	plastid	23.02	26.48
TraesCS2B01G031600.1	Wheat	mitochondrion	24.86	25.96
TraesCS2B01G031000.1	Wheat	plastid	26.89	25.66
TraesCS2B01G032300.2	Wheat	plastid	26.7	25.57
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	8.66	25.54
TraesCS2B01G031100.1	Wheat	plastid	25.97	24.87
TraesCS2B01G031500.1	Wheat	plastid	24.31	24.77
TraesCS7B01G407200.1	Wheat	cytosol	25.41	23.63
TraesCS6B01G008700.1	Wheat	cytosol	23.2	23.12
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	20.99	20.69

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6B01G092000	EnsemblPlants:TraesCS6B01G092000.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:-:67508219..67521569

Molecular Weight (calculated)

61917.3 Da

IEP (calculated)

6.125

GRAVY (calculated)

-0.290

Length

543 amino acids

Sequence
(BLAST)

001: MAAHVFSSVE PPLFSASPVA GVGGRRRRSF RPCMVTSPTR DSHAMADGFD FQEGLKSVKE MLHQNHKEKR KVMTDIDHLK RLCIDHYFQN EINDGMDACL
101: NLVDSDDLLD ATLSFRLLRE DGYDISADEV LQKFVNENED FNVDHTKDIR GLLSLQDISH LNMGEASLYK ANDFSRKHLT SAIKHLDLNL ARYVRHSLDH
201: PYHVSLMQYK ARHHLSYLQS LPTRNTAMEE LALADFKLNK LQHQMEMQEV KRWWMGLGLA QEIPATRDQI LKWYMFPMTI LQGQSFSRYR IEITKIIAIV
301: SIVDDIFDVV ATQEELSRFT EAIRTWDLAA AASLPSYMRS CYSSLYTITN DIADMAEREH GLNPIDHLKK DWAMLFDAFL LEAKWLSANH VPSLDDYLSN
401: GVITTGGPLA LVHLFSMLGH DPTRDATNLT AGRIPPIISC PSKILRLWDD MGSAKDEAQD GLDGSYKELY LKENPGGDAK GHMLALIESE WGELNRECFS
501: RRTFPPSMTR ISLNLARMVR VLFGYGEGQT LPVLEEYIRM LLL

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.