Factsheet for VIT_00s0271g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	97.72	81.63
VIT_00s0372g00060.t01	Wine grape	cytosol	31.12	80.21
VIT_00s0266g00020.t01	Wine grape	cytosol	79.67	78.85
VIT_00s0271g00010.t01	Wine grape	cytosol	80.29	78.66
VIT_00s0372g00020.t01	Wine grape	cytosol	65.98	78.33
VIT_00s0572g00010.t01	Wine grape	cytosol	68.88	73.78
VIT_00s0266g00070.t01	Wine grape	cytosol	78.01	72.73
VIT_00s0847g00020.t01	Wine grape	cytosol	59.96	70.32
VIT_00s0266g00010.t01	Wine grape	cytosol	73.24	69.63
VIT_00s0372g00040.t01	Wine grape	cytosol	73.03	69.43
VIT_00s0572g00020.t01	Wine grape	cytosol	72.82	69.23
VIT_00s0385g00020.t01	Wine grape	cytosol	69.29	65.75
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	65.77	64.69
Solyc10g005420.1.1	Tomato	cytosol	9.96	58.54
PGSC0003DMT400029275	Potato	cytosol	32.78	58.3
PGSC0003DMT400029354	Potato	cytosol	33.2	55.94
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	73.03	54.57
PGSC0003DMT400029266	Potato	cytosol	47.1	54.44
KRH41974	Soybean	cytosol	32.78	54.3
PGSC0003DMT400029265	Potato	cytosol	54.56	51.27
KRH49914	Soybean	plastid	60.17	50.61
GSMUA_Achr2P03420_001	Banana	cytosol	48.55	48.55
GSMUA_Achr9P21010_001	Banana	cytosol	47.1	47.39
KRH21637	Soybean	cytosol	52.28	47.19
Solyc05g026590.1.1	Tomato	cytosol	28.01	47.04
Zm00001d053918_P001	Maize	cytosol	27.18	45.8
EES04391	Sorghum	cytosol	39.42	45.56
KRH49915	Soybean	plastid	54.56	44.73
Solyc10g005390.2.1	Tomato	cytosol	52.07	44.58
HORVU6Hr1G012090.1	Barley	cytosol	34.02	43.27
AT1G61680.1	Thale cress	plastid	50.83	43.06
VIT_13s0067g00300.t01	Wine grape	cytosol	14.11	43.04
TraesCS6A01G067300.1	Wheat	cytosol	41.7	42.77
Zm00001d053916_P002	Maize	cytosol	39.42	42.7
TraesCS6B01G091000.1	Wheat	cytosol	36.31	40.98
TraesCS7A01G261500.1	Wheat	cytosol	14.32	40.59
VIT_00s0724g00010.t01	Wine grape	cytosol	35.89	40.52
VIT_00s2271g00010.t01	Wine grape	cytosol	32.99	40.25
TraesCS2A01G478100.1	Wheat	cytosol	28.63	40.12
VIT_13s0067g00090.t01	Wine grape	cytosol	29.05	40.0
VIT_18s0001g04200.t01	Wine grape	cytosol	9.75	39.5
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	41.7	39.49
VIT_13s0067g03770.t01	Wine grape	cytosol	28.42	39.48
VIT_12s0134g00140.t01	Wine grape	cytosol	23.86	39.38
TraesCS6A01G067500.1	Wheat	plastid	41.29	39.02
KXG29327	Sorghum	plastid	44.4	38.91
TraesCS6B01G091200.1	Wheat	cytosol	13.69	38.82
VIT_12s0134g00090.t01	Wine grape	cytosol	23.65	38.78
TraesCS6D01G048600.1	Wheat	plastid	42.74	37.8
TraesCS6B01G092000.1	Wheat	plastid	42.32	37.57
TraesCS6D01G065200.1	Wheat	plastid	42.32	37.43
EES04392	Sorghum	plastid	42.74	37.25
EES04390	Sorghum	plastid	43.57	37.23
VIT_13s0067g03740.t01	Wine grape	cytosol	32.57	37.2
Solyc10g005410.2.1	Tomato	plastid	48.34	37.04
TraesCS6B01G091500.1	Wheat	plastid	42.32	37.02
HORVU6Hr1G012270.1	Barley	plastid	41.7	36.95
TraesCSU01G116700.1	Wheat	plastid	42.12	36.91
TraesCS2B01G501400.1	Wheat	plastid	41.91	36.73
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	41.49	36.7
TraesCS6A01G067800.1	Wheat	plastid	41.7	36.61
VIT_00s0392g00030.t01	Wine grape	cytosol	24.07	36.59
TraesCSU01G116600.1	Wheat	plastid	41.7	36.55
TraesCS6A01G067600.1	Wheat	plastid	41.49	36.36
TraesCS6D01G065100.1	Wheat	plastid	41.49	36.36
TraesCS6B01G091100.1	Wheat	plastid	41.29	36.18
HORVU6Hr1G012170.1	Barley	plastid	41.08	36.07
Os10t0489500-00	Rice	cytosol	38.17	36.01
TraesCS6B01G091300.1	Wheat	plastid	41.08	36.0
VIT_13s0084g00010.t01	Wine grape	cytosol	41.08	35.93
TraesCS6B01G090800.1	Wheat	plastid	40.87	35.88
TraesCS6B01G092800.1	Wheat	plastid	40.87	35.88
TraesCS6A01G067700.1	Wheat	plastid	40.87	35.82
EES04394	Sorghum	endoplasmic reticulum	44.19	35.8
TraesCS6B01G091700.1	Wheat	plastid	40.46	35.65
Zm00001d015053_P001	Maize	plastid	42.95	35.63
TraesCS6B01G091400.1	Wheat	plastid	41.49	35.59
TraesCS2D01G477300.1	Wheat	plastid	41.7	35.58
TraesCS6B01G090500.1	Wheat	plastid	41.08	35.48
TraesCS7D01G540300.1	Wheat	cytosol, plastid	40.04	35.48
VIT_12s0134g00040.t01	Wine grape	mitochondrion	16.39	35.27
VIT_13s0067g03700.t01	Wine grape	cytosol	41.08	34.98
VIT_13s0067g00320.t01	Wine grape	cytosol	8.51	34.75
Zm00001d015054_P001	Maize	plastid	41.29	34.67
TraesCSU01G116900.1	Wheat	plastid	40.25	34.58
VIT_13s0067g00370.t01	Wine grape	plastid	42.12	34.41
HORVU6Hr1G012110.1	Barley	plastid	42.95	34.33
Os02t0121700-01	Rice	plastid	41.7	33.78
VIT_13s0067g00130.t01	Wine grape	plastid	35.89	33.21
VIT_13s0019g00060.t01	Wine grape	plastid	40.87	33.16
VIT_13s0067g03790.t01	Wine grape	plastid	40.25	32.72
VIT_12s0134g00030.t01	Wine grape	mitochondrion	38.59	32.12
VIT_13s0067g03830.t01	Wine grape	plastid	28.84	31.59
VIT_00s0361g00060.t01	Wine grape	cytosol	36.51	31.1
VIT_12s0134g00020.t01	Wine grape	plastid	37.97	30.45
VIT_12s0059g02720.t01	Wine grape	plastid	23.86	29.64
VIT_12s0059g02710.t01	Wine grape	plastid	30.91	28.71
VIT_00s0392g00060.t01	Wine grape	cytosol	24.27	27.92
VIT_08s0007g06860.t01	Wine grape	plastid	16.18	27.18
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	17.01	26.45
VIT_18s0001g04510.t01	Wine grape	plastid	15.77	24.84
VIT_18s0001g05430.t01	Wine grape	cytosol	19.29	19.29

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:100267150	MapMan:9.1.4.2	ProteinID:CCB62876	ProteinID:CCB62876.1
UniProt:F6I7F8	EMBL:FN596782	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	EntrezGene:LOC100267150	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF40	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000210ABDE	ArrayExpress:VIT_00s0271g00030	EnsemblPlantsGene:VIT_00s0271g00030	EnsemblPlants:VIT_00s0271g00030.t01
RefSeq:XP_019073853.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:20103916..20105918

Molecular Weight (calculated)

55278.0 Da

IEP (calculated)

5.708

GRAVY (calculated)

-0.300

Length

482 amino acids

Sequence
(BLAST)

001: MMIDAIQRLG IDYHFKEEIE AVLQRQYMKA GTHGESIQDL YEVALRFRLL RQEGYHVPAD VFNNFKNKEG KFKQNLSKDI KGLLGLYAAS QLSIEGEDIL
101: EEAQRFSSTL LNAGLEHLDH HEATVVGHTL EHPHHKSLPR FMAKSFLKDF QGPNGWLTVL QELAKADFNM VQSIHQQELL QISKWWQDLG LAEELKFARD
201: QPLKWHMWPM AVLPDPSLSE QRVELTKPIS MIYIIDDIFD VHGTLDELTL FTEAVNRWDI AAFETLPNYM KICFKTLDDI TNEISNKVYK EHGWDPVDSL
301: RKTWMGLCNA FLVEAKWFAS GHVPKAHEYL KNGVISSGVH VVLVHLFFLL GHGITRGNVD LVDDFPSTIS STAAILRLWD DLGSAKDENQ DGHDGSYIGC
401: YIKEHQGSSM ENARQNVTYM ISDLWKRLNK ECLSQHPFST SFTEGSLNIA RMVPLMYSYD DNQSLPHLEE HMKSLLFEAF PL

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.