Factsheet for VIT_12s0134g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0134g00140.t01	Wine grape	cytosol	97.96	98.63
VIT_00s0372g00060.t01	Wine grape	cytosol	30.27	47.59
VIT_13s0067g00320.t01	Wine grape	cytosol	15.31	38.14
VIT_13s0067g00090.t01	Wine grape	cytosol	43.54	36.57
VIT_13s0067g03770.t01	Wine grape	cytosol	41.84	35.45
VIT_00s0392g00030.t01	Wine grape	cytosol	37.07	34.38
VIT_12s0134g00040.t01	Wine grape	mitochondrion	25.85	33.93
VIT_13s0067g00300.t01	Wine grape	cytosol	18.03	33.54
GSMUA_Achr11P...	Banana	cytosol	55.78	32.8
KRH26850	Soybean	nucleus, plastid	59.86	30.99
VIT_00s2271g00010.t01	Wine grape	cytosol	39.12	29.11
KRH22498	Soybean	plastid	56.8	28.84
KRH26852	Soybean	plastid	56.12	28.25
VIT_13s0067g03740.t01	Wine grape	cytosol	40.48	28.2
VIT_00s0372g00020.t01	Wine grape	cytosol	37.76	27.34
VIT_00s0572g00010.t01	Wine grape	cytosol	39.12	25.56
VIT_00s0271g00030.t01	Wine grape	cytosol	38.78	23.65
VIT_13s0084g00010.t01	Wine grape	cytosol	43.54	23.23
VIT_00s0724g00010.t01	Wine grape	cytosol	33.67	23.18
VIT_00s0271g00010.t01	Wine grape	cytosol	38.78	23.17
VIT_00s0266g00020.t01	Wine grape	cytosol	38.1	23.0
VIT_00s0372g00040.t01	Wine grape	cytosol	39.46	22.88
VIT_00s0266g00010.t01	Wine grape	cytosol	39.46	22.88
VIT_00s0572g00020.t01	Wine grape	cytosol	39.46	22.88
VIT_13s0067g03700.t01	Wine grape	cytosol	42.18	21.91
VIT_00s0847g00020.t01	Wine grape	cytosol	29.59	21.17
VIT_13s0067g00370.t01	Wine grape	plastid	42.18	21.02
VIT_00s0266g00070.t01	Wine grape	cytosol	36.73	20.89
VIT_13s0067g03790.t01	Wine grape	plastid	41.16	20.4
VIT_13s0019g00060.t01	Wine grape	plastid	40.82	20.2
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	39.46	20.1
VIT_00s0385g00020.t01	Wine grape	cytosol	33.67	19.49
VIT_00s0361g00060.t01	Wine grape	cytosol	36.73	19.08
VIT_12s0134g00030.t01	Wine grape	mitochondrion	36.73	18.65
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	30.95	18.57
VIT_13s0067g00130.t01	Wine grape	plastid	32.31	18.23
VIT_12s0134g00020.t01	Wine grape	plastid	37.07	18.14
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	38.78	17.67
VIT_12s0059g02710.t01	Wine grape	plastid	29.59	16.76
VIT_13s0067g03830.t01	Wine grape	plastid	20.07	13.41
VIT_00s0392g00060.t01	Wine grape	cytosol	17.35	12.17
VIT_12s0059g02720.t01	Wine grape	plastid	12.93	9.79
VIT_18s0001g05430.t01	Wine grape	cytosol	4.08	2.49
VIT_18s0001g04510.t01	Wine grape	plastid	0.68	0.65
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	0.68	0.65
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	0.0	0.0
VIT_08s0007g06860.t01	Wine grape	plastid	0.0	0.0
VIT_18s0001g04200.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	EntrezGene:100265373	wikigene:100265373	MapMan:9.1.4.2	ProteinID:ADR66822	ProteinID:ADR66822.1
EMBL:AM433639	ProteinID:CAN78244	ProteinID:CAN78244.1	ProteinID:CBI17971	ProteinID:CBI17971.3	UniProt:D7SQP0
EMBL:FN594966	EntrezGene:GER	wikigene:GER	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872
EMBL:HQ326231	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF11
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synthase_metal-bd	UniParc:UPI0001BE12DD	ArrayExpress:VIT_12s0134g00090	EnsemblPlantsGene:VIT_12s0134g00090
EnsemblPlants:VIT_12s0134g00090.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:7625544..7626926

Molecular Weight (calculated)

33545.2 Da

IEP (calculated)

5.207

GRAVY (calculated)

-0.177

Length

294 amino acids

Sequence
(BLAST)

001: MECFLWTVGI FPDPRHSSCR IELTKAIAIL LVIDDIYDSY GSLDELALFT DAVKRWDLGA MDQLPEYMKI CYMALYNTTN DIAYRILKEH RWSVIEDLKR
101: TWMDIFGAFL AEAHCFKGGH VPSLEEYLNN AVTTGGTYMA LVHAFFLMGQ GVTRENMAML KPYPNIFSCS GKILRLWDDL GTAREEQERG DNASSIECYK
201: REREREMDTV LDDEACRKHI RQMIQSLWVE LNGELVASSA LPLSIIKAAF NLSRTAQVIY QHGDDNKTSS VEDHVQALLF RPVSSNGHAQ ITMH

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.