Factsheet for VIT_12s0059g02720.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g06860.t01	Wine grape	plastid	66.75	90.24
VIT_12s0059g02710.t01	Wine grape	plastid	86.86	64.93
VIT_18s0001g04200.t01	Wine grape	cytosol	14.43	47.06
VIT_13s0067g00300.t01	Wine grape	cytosol	17.01	41.77
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	43.3	40.38
CDY15827	Canola	cytosol	15.98	40.0
VIT_18s0001g04510.t01	Wine grape	plastid	28.35	35.95
VIT_13s0067g03830.t01	Wine grape	plastid	40.46	35.68
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	28.09	35.16
VIT_00s0724g00010.t01	Wine grape	cytosol	32.22	29.27
VIT_13s0067g00130.t01	Wine grape	plastid	38.66	28.79
VIT_13s0067g03700.t01	Wine grape	cytosol	39.43	27.03
VIT_13s0084g00010.t01	Wine grape	cytosol	38.14	26.86
VIT_13s0067g03790.t01	Wine grape	plastid	40.98	26.81
VIT_13s0019g00060.t01	Wine grape	plastid	40.72	26.6
VIT_00s0847g00020.t01	Wine grape	cytosol	26.8	25.3
VIT_12s0134g00030.t01	Wine grape	mitochondrion	37.63	25.22
VIT_00s0361g00060.t01	Wine grape	cytosol	36.6	25.09
VIT_00s2271g00010.t01	Wine grape	cytosol	25.52	25.06
VIT_13s0067g00370.t01	Wine grape	plastid	37.63	24.75
VIT_12s0134g00020.t01	Wine grape	plastid	38.14	24.63
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	30.93	24.49
VIT_18s0001g05430.t01	Wine grape	cytosol	30.41	24.48
VIT_00s0392g00060.t01	Wine grape	cytosol	25.77	23.87
VIT_00s0271g00030.t01	Wine grape	cytosol	29.64	23.86
VIT_13s0067g03740.t01	Wine grape	cytosol	25.77	23.7
VIT_00s0385g00020.t01	Wine grape	cytosol	30.93	23.62
VIT_00s0271g00010.t01	Wine grape	cytosol	28.61	22.56
VIT_00s0266g00020.t01	Wine grape	cytosol	27.58	21.97
VIT_00s0266g00070.t01	Wine grape	cytosol	28.87	21.66
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	31.96	21.49
VIT_00s0572g00020.t01	Wine grape	cytosol	27.32	20.91
VIT_00s0266g00010.t01	Wine grape	cytosol	27.32	20.91
VIT_00s0372g00040.t01	Wine grape	cytosol	27.06	20.71
VIT_12s0134g00040.t01	Wine grape	mitochondrion	11.86	20.54
VIT_13s0067g03770.t01	Wine grape	cytosol	18.04	20.17
VIT_00s0572g00010.t01	Wine grape	cytosol	22.94	19.78
VIT_13s0067g00090.t01	Wine grape	cytosol	17.01	18.86
VIT_00s0372g00020.t01	Wine grape	cytosol	19.33	18.47
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	28.09	16.9
VIT_00s0392g00030.t01	Wine grape	cytosol	13.14	16.09
VIT_12s0134g00140.t01	Wine grape	cytosol	9.79	13.01
VIT_12s0134g00090.t01	Wine grape	cytosol	9.79	12.93
VIT_00s0372g00060.t01	Wine grape	cytosol	5.93	12.3
VIT_13s0067g00320.t01	Wine grape	cytosol	0.52	1.69

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ProteinID:CBI28981	ProteinID:CBI28981.3	ncoils:Coil
UniProt:D7TEQ8	EMBL:FN595765	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016020	GO:GO:0016021
GO:GO:0016829	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576	TMHMM:TMhelix	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0001BE3093	ArrayExpress:VIT_12s0059g02720	EnsemblPlantsGene:VIT_12s0059g02720
EnsemblPlants:VIT_12s0059g02720.t01	RefSeq:XP_002275273	RefSeq:XP_002275273.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:+:7461794..7463233

Molecular Weight (calculated)

44990.7 Da

IEP (calculated)

5.224

GRAVY (calculated)

-0.324

Length

388 amino acids

Sequence
(BLAST)

001: MELTLASLSP LAFGAVNCRK IFALAPPRMR IKQGRSELPY LTITSKIDEL QVTERRSANY HPSIWDPKFI ESLSTPYTSD DFSNRLEDLK EEAKRLIKDA
101: RDTSSRLELI DSIQRLGVAY HLEEEIKEAI DLVHLDDTTT YDLFTTALRF RLLRQHGYSI SSDVFDKFRS KDGRFMDGIS QDIAGLLSLY EASHLGVEGE
201: DDLEEARRFS TMHLKGLVGN LEGDLADQVQ QSLEVPLHWR MPRLEARNFI DIYQRRNTKN SALLELAKLD YNLVQSVYQK ELKELTRWWT DLGFKENLSF
301: SRDRLMENYL WSMGFTPEPH FSKCRIGLTK FICIFSAVDD MYDIYGSPDE LRRFTDAVNR YEIYNIIIIQ AANLLYVLFC VTLGCQLP

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.