Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 81.63 | 97.72 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 26.34 | 81.28 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 67.94 | 79.67 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 67.24 | 79.67 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 55.81 | 79.31 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 67.76 | 76.97 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 64.82 | 76.33 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 53.55 | 75.18 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 58.23 | 74.67 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 64.64 | 73.57 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 64.64 | 73.57 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 65.86 | 73.5 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 64.3 | 73.18 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 68.11 | 60.93 |
| PGSC0003DMT400029275 | Potato | cytosol | 27.9 | 59.41 |
| Solyc10g005420.1.1 | Tomato | cytosol | 8.32 | 58.54 |
| KRH41974 | Soybean | cytosol | 28.77 | 57.04 |
| PGSC0003DMT400029354 | Potato | cytosol | 27.9 | 56.29 |
| PGSC0003DMT400029266 | Potato | cytosol | 40.38 | 55.88 |
| KRH49914 | Soybean | plastid | 53.55 | 53.93 |
| PGSC0003DMT400029265 | Potato | cytosol | 46.79 | 52.63 |
| KRH21637 | Soybean | cytosol | 46.27 | 50.0 |
| GSMUA_Achr2P03420_001 | Banana | cytosol | 40.9 | 48.96 |
| Solyc05g026590.1.1 | Tomato | cytosol | 24.26 | 48.78 |
| GSMUA_Achr9P21010_001 | Banana | cytosol | 39.69 | 47.81 |
| KRH49915 | Soybean | plastid | 48.01 | 47.11 |
| AT1G61680.1 | Thale cress | plastid | 45.93 | 46.57 |
| Solyc10g005390.2.1 | Tomato | cytosol | 45.23 | 46.36 |
| Zm00001d053918_P001 | Maize | cytosol | 22.88 | 46.15 |
| EES04391 | Sorghum | cytosol | 33.1 | 45.8 |
| HORVU6Hr1G012090.1 | Barley | cytosol | 28.42 | 43.27 |
| TraesCS6A01G067300.1 | Wheat | cytosol | 35.18 | 43.19 |
| VIT_13s0067g00300.t01 | Wine grape | cytosol | 11.79 | 43.04 |
| Zm00001d053916_P002 | Maize | cytosol | 32.93 | 42.7 |
| VIT_00s0724g00010.t01 | Wine grape | cytosol | 30.68 | 41.45 |
| TraesCS6B01G091000.1 | Wheat | cytosol | 30.5 | 41.22 |
| TraesCS2A01G478100.1 | Wheat | cytosol | 24.26 | 40.7 |
| TraesCS7A01G261500.1 | Wheat | cytosol | 11.96 | 40.59 |
| VIT_00s2271g00010.t01 | Wine grape | cytosol | 27.73 | 40.51 |
| HORVU6Hr1G088610.2 | Barley | cytosol, mitochondrion | 35.7 | 40.47 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 8.32 | 40.34 |
| VIT_12s0134g00140.t01 | Wine grape | cytosol | 20.28 | 40.07 |
| VIT_13s0067g00090.t01 | Wine grape | cytosol | 24.26 | 40.0 |
| KXG29327 | Sorghum | plastid | 37.95 | 39.82 |
| TraesCS6D01G048600.1 | Wheat | plastid | 37.61 | 39.82 |
| TraesCS6A01G067500.1 | Wheat | plastid | 35.18 | 39.8 |
| VIT_13s0067g03770.t01 | Wine grape | cytosol | 23.74 | 39.48 |
| VIT_12s0134g00090.t01 | Wine grape | cytosol | 20.1 | 39.46 |
| TraesCS6D01G065200.1 | Wheat | plastid | 37.26 | 39.45 |
| TraesCS6B01G092000.1 | Wheat | plastid | 36.74 | 39.04 |
| TraesCS2B01G501400.1 | Wheat | plastid | 37.09 | 38.91 |
| TraesCS6B01G091500.1 | Wheat | plastid | 37.09 | 38.84 |
| EES04390 | Sorghum | plastid | 37.95 | 38.83 |
| TraesCS6B01G091200.1 | Wheat | cytosol | 11.44 | 38.82 |
| Solyc10g005410.2.1 | Tomato | plastid | 42.29 | 38.79 |
| TraesCSU01G116700.1 | Wheat | plastid | 36.92 | 38.73 |
| EES04392 | Sorghum | plastid | 37.09 | 38.7 |
| TraesCS6B01G413300.1 | Wheat | cytosol, endoplasmic reticulum | 36.4 | 38.53 |
| TraesCS6A01G067800.1 | Wheat | plastid | 36.57 | 38.43 |
| TraesCS6D01G065100.1 | Wheat | plastid | 36.57 | 38.36 |
| TraesCSU01G116600.1 | Wheat | plastid | 36.57 | 38.36 |
| HORVU6Hr1G012170.1 | Barley | plastid | 36.4 | 38.25 |
| HORVU6Hr1G012270.1 | Barley | plastid | 36.05 | 38.24 |
| TraesCS6A01G067600.1 | Wheat | plastid | 36.4 | 38.18 |
| TraesCS6A01G067700.1 | Wheat | plastid | 36.4 | 38.18 |
| TraesCS2D01G477300.1 | Wheat | plastid | 37.26 | 38.05 |
| TraesCS6B01G091100.1 | Wheat | plastid | 36.22 | 38.0 |
| TraesCS6B01G090800.1 | Wheat | plastid | 36.05 | 37.89 |
| TraesCS6B01G092800.1 | Wheat | plastid | 36.05 | 37.89 |
| TraesCS6B01G091300.1 | Wheat | plastid | 36.05 | 37.82 |
| TraesCS6B01G091400.1 | Wheat | plastid | 36.74 | 37.72 |
| TraesCS6B01G090500.1 | Wheat | plastid | 36.4 | 37.63 |
| TraesCS6B01G091700.1 | Wheat | plastid | 35.53 | 37.48 |
| VIT_13s0067g03740.t01 | Wine grape | cytosol | 27.38 | 37.44 |
| VIT_13s0084g00010.t01 | Wine grape | cytosol | 35.53 | 37.21 |
| TraesCSU01G116900.1 | Wheat | plastid | 36.05 | 37.08 |
| Zm00001d015053_P001 | Maize | plastid | 37.26 | 37.01 |
| EES04394 | Sorghum | endoplasmic reticulum | 37.95 | 36.81 |
| TraesCS7D01G540300.1 | Wheat | cytosol, plastid | 34.66 | 36.76 |
| Os10t0489500-00 | Rice | cytosol | 32.41 | 36.59 |
| HORVU6Hr1G012110.1 | Barley | plastid | 37.78 | 36.15 |
| Zm00001d015054_P001 | Maize | plastid | 35.88 | 36.06 |
| VIT_13s0067g03700.t01 | Wine grape | cytosol | 35.36 | 36.04 |
| VIT_13s0067g00370.t01 | Wine grape | plastid | 36.74 | 35.93 |
| VIT_12s0134g00040.t01 | Wine grape | mitochondrion | 13.86 | 35.71 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 19.58 | 35.65 |
| VIT_13s0067g00130.t01 | Wine grape | plastid | 31.89 | 35.32 |
| Os02t0121700-01 | Rice | plastid | 36.22 | 35.13 |
| VIT_13s0019g00060.t01 | Wine grape | plastid | 35.88 | 34.85 |
| VIT_13s0067g03790.t01 | Wine grape | plastid | 35.36 | 34.4 |
| VIT_13s0067g00320.t01 | Wine grape | cytosol | 6.93 | 33.9 |
| VIT_13s0067g03830.t01 | Wine grape | plastid | 25.82 | 33.86 |
| VIT_12s0134g00030.t01 | Wine grape | mitochondrion | 33.28 | 33.16 |
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 32.06 | 32.69 |
| VIT_12s0059g02720.t01 | Wine grape | plastid | 21.49 | 31.96 |
| VIT_12s0134g00020.t01 | Wine grape | plastid | 32.93 | 31.61 |
| VIT_08s0007g06860.t01 | Wine grape | plastid | 15.25 | 30.66 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 22.18 | 30.55 |
| VIT_12s0059g02710.t01 | Wine grape | plastid | 27.21 | 30.25 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 15.08 | 28.06 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 14.56 | 27.45 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 16.81 | 20.12 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | EntrezGene:100266449 | wikigene:100266449 | EntrezGene:100267150 | wikigene:100267150 |
| MapMan:9.1.4.2 | ProteinID:ADR74211 | ProteinID:ADR74211.1 | ProteinID:ADR74212 | ProteinID:ADR74212.1 | ProteinID:AEY82696 |
| ProteinID:AEY82696.1 | EMBL:AM458362 | ProteinID:CAN76849 | ProteinID:CAN76849.1 | ProteinID:CCB62879 | ProteinID:CCB62879.1 |
| UniProt:F6I7G1 | EMBL:FN596782 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | GO:GO:0034007 | GO:GO:0046872 |
| EMBL:HM807392 | EMBL:HM807393 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | EMBL:JQ062931 |
| EntrezGene:LOC100266449 | wikigene:LOC100266449 | EntrezGene:LOC100267150 | wikigene:LOC100267150 | PFAM:PF01397 | PFAM:PF03936 |
| PANTHER:PTHR31225 | PANTHER:PTHR31225:SF40 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N |
| InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0001985E35 | ArrayExpress:VIT_00s0271g00060 | EnsemblPlantsGene:VIT_00s0271g00060 |
| EnsemblPlants:VIT_00s0271g00060.t01 | RefSeq:XP_002263717 | RefSeq:XP_002263717.2 | RefSeq:XP_002270107 | RefSeq:XP_002270107.2 | SEG:seg |
Description
No Description!
Coordinates
chrUn:+:20118944..20121282
Molecular Weight (calculated)
66272.0 Da
IEP (calculated)
6.167
GRAVY (calculated)
-0.348
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSPAFYAC SIPPVGPNKF TELGQSKFNN VVLVPTAQKW SIAHDHTLVY KPLRKHNHQS QHLSFTDEFY VKHAQRLDEI RNVFSEVGED TLEGLMMIDA
101: IQRLGIDYHF KEEIEAVLQR QYTKASTHGE SIQDLYEVAL RFRLLRQEGY HVPADVFNNF KNKEGKFKQN LSKDIKGLLG LYEASQLSIE GEDILEEAQR
201: FSSTLLNAGL EHLDHHEATV VGHTLEHPHH KSLPRFMAKS FLKDFQGPNG WLTVLQELAK ADFNMVQSIH QQELLQISKW WQDLGLAEEL KFARDQPLKW
301: HMWPMAVLPD PSLSEQRVEL TKPISMIYII DDIFDVHGTL DELTLFTEAV NRWDIAAFET LPNYMKICFK TLDEITNEIS NKVYKEHGWN PVDSLRKTWM
401: SLCNAFLVEA KWFASGHVPK AHEYLKNGVI SSGVHVVLVH LFFLLGHGIT RGNVDLVDDF PSIISSTAAI LRLWDDLGSA KDENQDGHDG SYIECYIKEH
501: QGSSMENARQ NVTYMISDLR KRLNKECLSQ HPFSTSFTKG SLNIARMVPL MYSYDDNQSL PHLEEHMKSL LFEAYPL
101: IQRLGIDYHF KEEIEAVLQR QYTKASTHGE SIQDLYEVAL RFRLLRQEGY HVPADVFNNF KNKEGKFKQN LSKDIKGLLG LYEASQLSIE GEDILEEAQR
201: FSSTLLNAGL EHLDHHEATV VGHTLEHPHH KSLPRFMAKS FLKDFQGPNG WLTVLQELAK ADFNMVQSIH QQELLQISKW WQDLGLAEEL KFARDQPLKW
301: HMWPMAVLPD PSLSEQRVEL TKPISMIYII DDIFDVHGTL DELTLFTEAV NRWDIAAFET LPNYMKICFK TLDEITNEIS NKVYKEHGWN PVDSLRKTWM
401: SLCNAFLVEA KWFASGHVPK AHEYLKNGVI SSGVHVVLVH LFFLLGHGIT RGNVDLVDDF PSIISSTAAI LRLWDDLGSA KDENQDGHDG SYIECYIKEH
501: QGSSMENARQ NVTYMISDLR KRLNKECLSQ HPFSTSFTKG SLNIARMVPL MYSYDDNQSL PHLEEHMKSL LFEAYPL
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.