Factsheet for TraesCS6B01G091700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G067800.1	Wheat	plastid	90.13	89.8
TraesCS6B01G092800.1	Wheat	plastid	87.75	87.43
HORVU6Hr1G012170.1	Barley	plastid	86.65	86.34
TraesCS6B01G091500.1	Wheat	plastid	84.1	83.48
TraesCS6B01G091400.1	Wheat	plastid	82.82	80.61
TraesCS2B01G501400.1	Wheat	plastid	78.98	78.55
TraesCS6B01G090800.1	Wheat	plastid	78.61	78.32
TraesCS6B01G091000.1	Wheat	cytosol	59.96	76.81
TraesCS6B01G091300.1	Wheat	plastid	76.97	76.55
TraesCS6B01G091100.1	Wheat	plastid	76.97	76.55
TraesCS6B01G091200.1	Wheat	cytosol	22.67	72.94
TraesCS6B01G090500.1	Wheat	plastid	72.21	70.79
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	64.9	65.14
EES04391	Sorghum	cytosol	48.63	63.79
TraesCS6B01G092000.1	Wheat	plastid	63.25	63.72
Zm00001d053918_P001	Maize	cytosol	31.81	60.84
Os10t0489500-00	Rice	cytosol	56.12	60.08
KXG29327	Sorghum	plastid	60.33	60.0
Zm00001d053916_P002	Maize	cytosol	48.08	59.1
EES04392	Sorghum	plastid	59.41	58.77
Os02t0121700-01	Rice	plastid	61.43	56.47
EES04390	Sorghum	plastid	58.14	56.38
EES04394	Sorghum	endoplasmic reticulum	58.87	54.12
Zm00001d015053_P001	Maize	plastid	57.4	54.04
Zm00001d015054_P001	Maize	plastid	55.21	52.61
Solyc10g005420.1.1	Tomato	cytosol	7.31	48.78
VIT_00s0372g00060.t01	Wine grape	cytosol	15.72	45.99
PGSC0003DMT400029354	Potato	cytosol	23.03	44.06
PGSC0003DMT400029275	Potato	cytosol	21.57	43.54
GSMUA_Achr2P03420_001	Banana	cytosol	38.21	43.36
GSMUA_Achr9P21010_001	Banana	cytosol	37.48	42.8
VIT_00s0372g00020.t01	Wine grape	cytosol	30.71	41.38
VIT_00s0271g00030.t01	Wine grape	cytosol	35.65	40.46
VIT_00s0572g00010.t01	Wine grape	cytosol	33.09	40.22
VIT_00s0266g00020.t01	Wine grape	cytosol	35.65	40.04
VIT_00s0271g00010.t01	Wine grape	cytosol	35.83	39.84
PGSC0003DMT400029266	Potato	cytosol	29.25	38.37
VIT_00s0847g00020.t01	Wine grape	cytosol	28.7	38.2
VIT_00s0572g00020.t01	Wine grape	cytosol	35.28	38.07
VIT_00s0266g00010.t01	Wine grape	cytosol	35.28	38.07
VIT_00s0372g00040.t01	Wine grape	cytosol	35.28	38.07
PGSC0003DMT400029265	Potato	cytosol	34.55	36.84
VIT_00s0266g00070.t01	Wine grape	cytosol	34.37	36.36
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	37.48	35.53
VIT_00s0385g00020.t01	Wine grape	cytosol	32.91	35.43
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.08	34.69
KRH21637	Soybean	cytosol	32.72	33.52
Solyc10g005390.2.1	Tomato	cytosol	34.37	33.39
Solyc05g026590.1.1	Tomato	cytosol	17.37	33.1
KRH49914	Soybean	plastid	33.82	32.29
KRH49915	Soybean	plastid	32.91	30.61
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	35.47	30.08
KRH41974	Soybean	cytosol	15.9	29.9
Solyc10g005410.2.1	Tomato	plastid	33.46	29.09
AT1G61680.1	Thale cress	plastid	30.16	29.0
TraesCS2B01G031400.1	Wheat	cytosol	13.16	26.77
TraesCS2B01G031300.1	Wheat	cytosol	13.16	26.77
TraesCS2B01G030900.1	Wheat	plastid	21.94	25.42
TraesCS2B01G031600.1	Wheat	mitochondrion	23.03	24.23
TraesCS2B01G032300.2	Wheat	plastid	25.05	24.16
TraesCS2B01G031100.1	Wheat	plastid	24.68	23.81
TraesCS2B01G031000.1	Wheat	plastid	24.68	23.73
TraesCS2B01G031500.1	Wheat	plastid	22.67	23.26
TraesCS7B01G407200.1	Wheat	cytosol	24.5	22.95
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	7.5	22.28
TraesCS6B01G008700.1	Wheat	cytosol	19.93	20.0
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	19.38	19.24

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6B01G091700	EnsemblPlants:TraesCS6B01G091700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:-:67408283..67411671

Molecular Weight (calculated)

63223.1 Da

IEP (calculated)

6.470

GRAVY (calculated)

-0.254

Length

547 amino acids

Sequence
(BLAST)

001: MAAAHVFSSS VQPLHHSASP VAGNGGRSGR NRSFFRPSTV ICPGREPPSD VLSDDFDFQE SLTNVQALLH HRQTSRRGLL TTVDHLKRLC IDYYFQDEID
101: TIMDSCADLI HSFGRCIVLI IYDMCLRPLL NELADDVLRK FRNDNGDFNL GLSKDIRGLL SLQDMSHLNV GESSLYNANE FSSRHLRFAI KYLEPNLARY
201: VRRSLDHPYH VSLMQYKARH QLSFLQNMPT RNMAIENLAL AEFTIKKLQH QREMQEVKRW WMDLGLTQEI PAARDHILKW YMWPMTVLEG LSFSRYRIEI
301: TKIISMVYIV DDIFDLVATQ EELSLFTEAI KMWDLAAVDS LPSYMRSCYK ALYTITSDIA DMVRKEHGLS PINHLKKAWA TLFNGFMIEG KWLSTNQIPT
401: SEDYLRNGIV TSGAPLVFMH LLFMLGHELT EGNNDDIHRI ISCPAKIMRL WDDMGSAKDE SQNGLDGSYK ELYQRENPSG DVEKHMLEMI GSEWECMNRE
501: CFSWTKSTLS HSFIIASLNF ARMVRVMYGY DEQKLPVLED YTRMLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.