Factsheet for TraesCS6B01G008700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0108600-00	Rice	cytosol	14.5	56.43
EES09506	Sorghum	cytosol	55.41	55.01
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	39.63	39.2
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	16.51	35.86
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	11.56	34.24
TraesCS2B01G031600.1	Wheat	mitochondrion	24.59	25.77
TraesCS2B01G032300.2	Wheat	plastid	26.61	25.57
TraesCS2B01G031100.1	Wheat	plastid	26.42	25.4
TraesCS2B01G030900.1	Wheat	plastid	21.83	25.21
TraesCS2B01G031400.1	Wheat	cytosol	12.29	24.91
TraesCS2B01G031000.1	Wheat	plastid	25.87	24.78
TraesCS2B01G031300.1	Wheat	cytosol	12.11	24.54
TraesCS2B01G031500.1	Wheat	plastid	23.3	23.83
TraesCS6B01G092000.1	Wheat	plastid	23.12	23.2
TraesCS6B01G091200.1	Wheat	cytosol	7.16	22.94
TraesCS7B01G407200.1	Wheat	cytosol	24.22	22.6
TraesCS6B01G091000.1	Wheat	cytosol	17.43	22.25
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	21.83	21.83
TraesCS6B01G090500.1	Wheat	plastid	21.83	21.33
TraesCS6B01G091300.1	Wheat	plastid	21.47	21.27
TraesCS6B01G090800.1	Wheat	plastid	21.28	21.13
TraesCS6B01G091100.1	Wheat	plastid	21.28	21.09
TraesCS6B01G091500.1	Wheat	plastid	20.73	20.51
TraesCS6B01G091700.1	Wheat	plastid	20.0	19.93
TraesCS6B01G092800.1	Wheat	plastid	20.0	19.85
TraesCS2B01G501400.1	Wheat	plastid	20.0	19.82
TraesCS6B01G091400.1	Wheat	plastid	20.37	19.75

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF7
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6B01G008700	EnsemblPlants:TraesCS6B01G008700.1	TIGR:cd00684	:	:

Description

No Description!

Coordinates

chr6B:+:5683072..5689564

Molecular Weight (calculated)

62705.8 Da

IEP (calculated)

5.251

GRAVY (calculated)

-0.359

Length

545 amino acids

Sequence
(BLAST)

001: MEQQKPERRV IGQLEDSKWT RYFLDAVQLP CSGQSQKMIK DRRDELVQKV CCMIKRYTSS KKDISKGMRA VDAIEHLGVG YHFEEEVNKF MDVLIFTSID
101: ENDLAGVALR FRLLRQHQYD IPCEVLKSFK DEKGEHFKDD VQSDIGTLLS LYEAAHLAKC GEESLTDSIR FTTSCLSSLS GGNQLPDHLI NRVRHALATP
201: SQRRMKRLEA KLYISIYEKD DEGDQDILEL AKLDFHILQL MHRDEIKSIS LWYKDLNSGS ALGEYIRERP VECYFWALGV FYEPKYAKAR MMFAKLIKMF
301: SFFDDTFDSY GTLEELRQFN QAVQRWDEED ARRIGKCYGY VMSNISSILN QFVEDGASAI GIACTKEIIK HVSRCMLQEV LWREEEQVPP VQDHLRITAI
401: STFYWALASI SFTGMDAGDD VFTWATSFPK IIENAAMVSR LMDDISGHEC EKERSNVATA VDCYIKEHGV TVDQAKEALG RLVEEQWRSI NEEFLTNTTV
501: PVEVLTRVVN LARVMDCMYK KLDGYTHSSE TADPIDKLLN SCVNH

Best Arabidopsis Sequence Match ( AT5G23960.1 )
(BLAST)

001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE WLPVVPDEIP IPDSMKFIYN VTVEFYDKLD EELEKEGRSG CGFHLKKSLQ KTANGYMQEA KWLKKDYIAT FDEYKENAIL
401: SSGYYALIAM TFVRMTDVAK LDAFEWLSSH PKIRVASEII SRFTDDISSY EFEHKREHVA TGIDCYMQQF GVSKERAVEV MGNIVSDAWK DLNQELMRPH
501: VFPFPLLMRV LNLSRVIDVF YRYQDAYTNP KLLKEHIVSL LIETIPI

Arabidopsis Description

TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.