Factsheet for TraesCS6B01G092800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G067800.1	Wheat	plastid	91.8	91.8
TraesCS6D01G065200.1	Wheat	plastid	90.89	91.56
TraesCS6D01G048600.1	Wheat	plastid	90.53	91.19
HORVU6Hr1G012170.1	Barley	plastid	88.89	88.89
TraesCS6B01G091700.1	Wheat	plastid	87.43	87.75
TraesCS6B01G091500.1	Wheat	plastid	85.25	84.94
TraesCS6B01G091400.1	Wheat	plastid	84.52	82.56
TraesCS6B01G090800.1	Wheat	plastid	81.06	81.06
TraesCS2B01G501400.1	Wheat	plastid	80.51	80.36
TraesCS6B01G091100.1	Wheat	plastid	80.33	80.18
TraesCS6B01G091300.1	Wheat	plastid	80.15	80.0
TraesCS6B01G091000.1	Wheat	cytosol	61.75	79.39
TraesCS6B01G091200.1	Wheat	cytosol	23.5	75.88
TraesCS6B01G090500.1	Wheat	plastid	74.86	73.66
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	65.76	66.24
TraesCS6B01G092000.1	Wheat	plastid	64.85	65.56
EES04391	Sorghum	cytosol	49.18	64.75
KXG29327	Sorghum	plastid	63.39	63.27
Zm00001d053918_P001	Maize	cytosol	32.24	61.89
Os10t0489500-00	Rice	cytosol	57.56	61.84
EES04392	Sorghum	plastid	61.93	61.48
Zm00001d053916_P002	Maize	cytosol	49.36	60.9
Os02t0121700-01	Rice	plastid	63.39	58.49
EES04390	Sorghum	plastid	59.74	58.16
EES04394	Sorghum	endoplasmic reticulum	61.75	56.97
Zm00001d015053_P001	Maize	plastid	58.47	55.25
Zm00001d015054_P001	Maize	plastid	56.47	54.01
Solyc10g005420.1.1	Tomato	cytosol	7.29	48.78
VIT_00s0372g00060.t01	Wine grape	cytosol	15.3	44.92
GSMUA_Achr2P03420_001	Banana	cytosol	39.16	44.61
GSMUA_Achr9P21010_001	Banana	cytosol	37.89	43.42
PGSC0003DMT400029354	Potato	cytosol	22.4	43.01
PGSC0003DMT400029275	Potato	cytosol	20.95	42.44
VIT_00s0372g00020.t01	Wine grape	cytosol	30.42	41.13
VIT_00s0572g00010.t01	Wine grape	cytosol	33.52	40.89
VIT_00s0271g00030.t01	Wine grape	cytosol	35.88	40.87
VIT_00s0266g00020.t01	Wine grape	cytosol	36.25	40.86
VIT_00s0271g00010.t01	Wine grape	cytosol	36.25	40.45
PGSC0003DMT400029266	Potato	cytosol	29.87	39.33
VIT_00s0372g00040.t01	Wine grape	cytosol	35.34	38.26
VIT_00s0572g00020.t01	Wine grape	cytosol	35.34	38.26
VIT_00s0266g00010.t01	Wine grape	cytosol	35.34	38.26
PGSC0003DMT400029265	Potato	cytosol	35.52	38.01
VIT_00s0847g00020.t01	Wine grape	cytosol	28.42	37.96
VIT_00s0266g00070.t01	Wine grape	cytosol	35.15	37.33
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	37.89	36.05
VIT_00s0385g00020.t01	Wine grape	cytosol	33.33	36.02
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.33	35.1
Solyc05g026590.1.1	Tomato	cytosol	18.03	34.49
KRH21637	Soybean	cytosol	33.52	34.46
Solyc10g005390.2.1	Tomato	cytosol	34.61	33.75
KRH49914	Soybean	plastid	34.79	33.33
KRH49915	Soybean	plastid	33.15	30.95
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	35.7	30.39
AT1G61680.1	Thale cress	plastid	31.15	30.05
KRH41974	Soybean	cytosol	15.85	29.9
Solyc10g005410.2.1	Tomato	plastid	34.24	29.89
TraesCS2B01G031400.1	Wheat	cytosol	13.3	27.14
TraesCS2B01G031300.1	Wheat	cytosol	13.3	27.14
TraesCS2B01G030900.1	Wheat	plastid	22.59	26.27
TraesCS2B01G031600.1	Wheat	mitochondrion	23.5	24.81
TraesCS2B01G032300.2	Wheat	plastid	25.5	24.69
TraesCS2B01G031100.1	Wheat	plastid	25.32	24.52
TraesCS2B01G031000.1	Wheat	plastid	25.32	24.43
TraesCS2B01G031500.1	Wheat	plastid	23.32	24.02
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	8.01	23.91
TraesCS7B01G407200.1	Wheat	cytosol	25.32	23.8
TraesCS6B01G008700.1	Wheat	cytosol	19.85	20.0
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	18.58	18.51

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6B01G092800	EnsemblPlants:TraesCS6B01G092800.1	:	:	:

Description

No Description!

Coordinates

chr6B:+:68748391..68752223

Molecular Weight (calculated)

63259.6 Da

IEP (calculated)

6.478

GRAVY (calculated)

-0.297

Length

549 amino acids

Sequence
(BLAST)

001: MAAAHVFFSF SVQPLHHSAS PAARNGGWSG RNHAFFRPST VICPGREPAS HELSDDFDFQ ESVTNVQALL HHHLMSRRGL LTTVDHLKRL CIDHYFQDDI
101: DTIIDSCADL IHSDDLLDAT LSLRLTREAG YNVSADDVLQ KFRNDNGEFN LGLSKDIRGL LSLHDMSHLN VGESSLYKAN EFSSKQLRFA IKYLEPNLAR
201: YVRRSLDHPY HVSLMQYKAR HHLSYLQSMH TRNMAIENLA LAEFTIKKLQ HQREMQEVKR WWMDLGLAQE IPSARDQVLK WYMWSMTILE GFSFSRYRIE
301: ITKIISMVYI VDDIFDLVAT QEELSLFTEA IKMWDLAAVH SLPSYMISCY KALYTITSDV ADMVRKEHGS SPINHLKKAW ATLFDGFMIE GKWLSTNQIP
401: TSEDYLGNGI VTSGAPLVFM HLLFMLGHEL PECNNDDIHR IISCPAKIMR LWDDMGSAKD ESQNGLDGSY KELYQRENPR GDAEKHMLEM IRSEWEGLNR
501: ECFSRTKSTL SHSFTTASLN FARMVLVMYG YNNEQKLPVL EDYTRMLLF

Best Arabidopsis Sequence Match ( AT1G61680.2 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE NKKGGFKDVV KNDVKGLTEL FEASELRVEG EETLDGAREF TYSRLNELCS
201: GRESHQKQEI MKSLAQPRHK TVRGLTSKRF TSMIKIAGQE DPEWLQSLLR VAEIDSIRLK SLTQGEMSQT FKWWTELGLE KDVEKARSQP LKWHTWSMKI
301: LQDPTLTEQR LDLTKPISLV YVIDDIFDVY GELEELTIFT RVVERWDHKG LKTLPKYMRV CFEALDMITT EISMKIYKSH GWNPTYALRQ SWASLCKAFL
401: VEAKWFNSGY LPTTEEYMKN GVVSSGVHLV MLHAYILLGE ELTKEKVELI ESNPGIVSSA ATILRLWDDL GSAKDENQDG TDGSYVECYL NEYKGSTVDE
501: ARTHVAQKIS RAWKRLNREC LNPCPFSRSF SKACLNIART VPLMYSYDDD QRLPDEYLKS LM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.