Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g105940.2.1 | Tomato | cytosol | 36.59 | 28.57 |
| TraesCS7A01G261500.1 | Wheat | cytosol | 43.9 | 21.18 |
| Solyc05g026590.1.1 | Tomato | cytosol | 73.17 | 20.91 |
| TraesCS6B01G091200.1 | Wheat | cytosol | 42.68 | 20.59 |
| Solyc01g101220.1.1 | Tomato | cytosol | 30.49 | 14.88 |
| Solyc10g005390.2.1 | Tomato | cytosol | 81.71 | 11.9 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 58.54 | 11.68 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 25.61 | 11.23 |
| Solyc10g005410.2.1 | Tomato | plastid | 84.15 | 10.97 |
| Solyc01g105850.2.1 | Tomato | cytosol | 36.59 | 10.79 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 58.54 | 10.67 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 52.44 | 10.59 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 58.54 | 9.96 |
| HORVU6Hr1G012090.1 | Barley | cytosol | 43.9 | 9.5 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 58.54 | 9.47 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 58.54 | 9.47 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 56.1 | 9.45 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 57.32 | 9.27 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 54.88 | 9.18 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 54.88 | 9.15 |
| EES04391 | Sorghum | cytosol | 46.34 | 9.11 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 54.88 | 8.86 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 54.88 | 8.7 |
| KRH21637 | Soybean | cytosol | 54.88 | 8.43 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 58.54 | 8.32 |
| GSMUA_Achr2P03420_001 | Banana | cytosol | 48.78 | 8.3 |
| GSMUA_Achr9P21010_001 | Banana | cytosol | 47.56 | 8.14 |
| TraesCS6A01G067300.1 | Wheat | cytosol | 46.34 | 8.09 |
| Zm00001d053918_P001 | Maize | cytosol | 28.05 | 8.04 |
| HORVU6Hr1G088610.2 | Barley | cytosol, mitochondrion | 47.56 | 7.66 |
| HORVU6Hr1G012170.1 | Barley | plastid | 51.22 | 7.65 |
| TraesCS6A01G067800.1 | Wheat | plastid | 51.22 | 7.65 |
| TraesCS6D01G048600.1 | Wheat | plastid | 50.0 | 7.52 |
| TraesCS6D01G065200.1 | Wheat | plastid | 50.0 | 7.52 |
| KRH49914 | Soybean | plastid | 52.44 | 7.5 |
| TraesCS6D01G065100.1 | Wheat | plastid | 50.0 | 7.45 |
| Zm00001d053916_P002 | Maize | cytosol | 40.24 | 7.42 |
| TraesCS6B01G090500.1 | Wheat | plastid | 50.0 | 7.35 |
| TraesCS6B01G091700.1 | Wheat | plastid | 48.78 | 7.31 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 57.32 | 7.29 |
| TraesCS6B01G092800.1 | Wheat | plastid | 48.78 | 7.29 |
| TraesCS6B01G091500.1 | Wheat | plastid | 48.78 | 7.26 |
| TraesCS6A01G067500.1 | Wheat | plastid | 45.12 | 7.25 |
| TraesCS6B01G413300.1 | Wheat | cytosol, endoplasmic reticulum | 47.56 | 7.16 |
| KRH49915 | Soybean | plastid | 51.22 | 7.14 |
| TraesCS6B01G091400.1 | Wheat | plastid | 48.78 | 7.12 |
| TraesCS6A01G067700.1 | Wheat | plastid | 47.56 | 7.09 |
| TraesCS2B01G501400.1 | Wheat | plastid | 47.56 | 7.09 |
| TraesCS2D01G477300.1 | Wheat | plastid | 48.78 | 7.08 |
| Solyc01g105960.2.1 | Tomato | cytosol | 30.49 | 7.06 |
| TraesCSU01G116900.1 | Wheat | plastid | 47.56 | 6.95 |
| KXG29327 | Sorghum | plastid | 46.34 | 6.91 |
| Os10t0489500-00 | Rice | cytosol | 42.68 | 6.85 |
| TraesCS6B01G090800.1 | Wheat | plastid | 45.12 | 6.74 |
| EES04390 | Sorghum | plastid | 46.34 | 6.74 |
| TraesCS6B01G091300.1 | Wheat | plastid | 45.12 | 6.73 |
| TraesCS6B01G091100.1 | Wheat | plastid | 45.12 | 6.73 |
| TraesCS6A01G067600.1 | Wheat | plastid | 45.12 | 6.73 |
| Zm00001d015053_P001 | Maize | plastid | 47.56 | 6.71 |
| AT1G61680.1 | Thale cress | plastid | 46.34 | 6.68 |
| HORVU6Hr1G012110.1 | Barley | plastid | 48.78 | 6.63 |
| TraesCS6B01G092000.1 | Wheat | plastid | 43.9 | 6.63 |
| TraesCS7D01G540300.1 | Wheat | cytosol, plastid | 43.9 | 6.62 |
| HORVU6Hr1G012270.1 | Barley | plastid | 43.9 | 6.62 |
| TraesCS6B01G091000.1 | Wheat | cytosol | 34.15 | 6.56 |
| TraesCSU01G116700.1 | Wheat | plastid | 43.9 | 6.55 |
| TraesCSU01G116600.1 | Wheat | plastid | 43.9 | 6.55 |
| EES04392 | Sorghum | plastid | 42.68 | 6.33 |
| Zm00001d015054_P001 | Maize | plastid | 42.68 | 6.1 |
| Os02t0121700-01 | Rice | plastid | 42.68 | 5.88 |
| EES04394 | Sorghum | endoplasmic reticulum | 42.68 | 5.88 |
| Solyc01g101190.2.1 | Tomato | cytosol | 39.02 | 5.8 |
| Solyc01g105900.2.1 | Tomato | plastid | 36.59 | 5.61 |
| Solyc01g105920.2.1 | Tomato | plastid | 39.02 | 5.41 |
| Solyc01g105890.2.1 | Tomato | plastid | 37.8 | 5.09 |
| Solyc01g105880.2.1 | Tomato | mitochondrion, plastid | 35.37 | 4.92 |
| Solyc01g105870.2.1 | Tomato | plastid | 34.15 | 4.61 |
| Solyc03g007730.1.1 | Tomato | cytosol | 29.27 | 4.27 |
| Solyc02g079840.1.1 | Tomato | cytosol | 26.83 | 4.09 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 26.83 | 4.02 |
| KRH41974 | Soybean | cytosol | 10.98 | 3.09 |
| TraesCS2A01G478100.1 | Wheat | cytosol | 8.54 | 2.03 |
| Solyc01g105860.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc01g105950.2.1 | Tomato | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc10g005420.1.1 | EnsemblPlantsGene:Solyc10g005420.1 | Gene3D:1.10.600.10 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 | InterPro:Isoprenoid_synthase_dom_sf | InterPro:Terpene_synthase_metal-bd |
| PANTHER:PTHR31225 | PANTHER:PTHR31225:SF0 | PFAM:PF03936 | SUPFAM:SSF48576 | UniParc:UPI000276C75F | UniProt:K4CX74 |
| MapMan:50.4.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:312406..313367
Molecular Weight (calculated)
9978.0 Da
IEP (calculated)
4.663
GRAVY (calculated)
-0.402
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MEYSITEEIH QHELTQVSRW WRRLGLAEEL KLLRDQPLKW YTWPMAVLED PKKSQERIEL AKCISFVYVI DDIFYVYGSV EE
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE NKKGGFKDVV KNDVKGLTEL FEASELRVEG EETLDGAREF TYSRLNELCS
201: GRESHQKQEI MKSLAQPRHK TVRGLTSKRF TSMIKIAGQE DPEWLQSLLR VAEIDSIRLK SLTQGEMSQT FKWWTELGLE KDVEKARSQP LKWHTWSMKI
301: LQDPTLTEQR LDLTKPISLV YVIDDIFDVY GELEELTIFT RVVERWDHKG LKTLPKYMRV CFEALDMITT EISMKIYKSH GWNPTYALRQ SWASLCKAFL
401: VEAKWFNSGY LPTTEEYMKN GVVSSGVHLV MLHAYILLGE ELTKEKVELI ESNPGIVSSA ATILRLWDDL GSAKDENQDG TDGSYVECYL NEYKGSTVDE
501: ARTHVAQKIS RAWKRLNREC LNPCPFSRSF SKACLNIART VPLMYSYDDD QRLPDEYLKS LM
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE NKKGGFKDVV KNDVKGLTEL FEASELRVEG EETLDGAREF TYSRLNELCS
201: GRESHQKQEI MKSLAQPRHK TVRGLTSKRF TSMIKIAGQE DPEWLQSLLR VAEIDSIRLK SLTQGEMSQT FKWWTELGLE KDVEKARSQP LKWHTWSMKI
301: LQDPTLTEQR LDLTKPISLV YVIDDIFDVY GELEELTIFT RVVERWDHKG LKTLPKYMRV CFEALDMITT EISMKIYKSH GWNPTYALRQ SWASLCKAFL
401: VEAKWFNSGY LPTTEEYMKN GVVSSGVHLV MLHAYILLGE ELTKEKVELI ESNPGIVSSA ATILRLWDDL GSAKDENQDG TDGSYVECYL NEYKGSTVDE
501: ARTHVAQKIS RAWKRLNREC LNPCPFSRSF SKACLNIART VPLMYSYDDD QRLPDEYLKS LM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.