Factsheet for Solyc02g079840.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055897	Potato	cytosol	20.82	92.56
Solyc01g105940.2.1	Tomato	cytosol	11.71	60.0
Solyc01g105850.2.1	Tomato	cytosol	24.72	47.84
Solyc01g105860.2.1	Tomato	cytosol	18.96	46.79
CDY66920	Canola	cytosol	28.62	46.53
Solyc01g105960.2.1	Tomato	cytosol	29.93	45.48
Bra025163.1-P	Field mustard	cytosol	47.21	45.36
CDY68676	Canola	cytosol	31.04	44.41
Solyc01g105900.2.1	Tomato	plastid	44.05	44.3
Solyc01g105920.2.1	Tomato	plastid	48.7	44.26
CDY53648	Canola	cytosol	21.0	44.14
CDY53129	Canola	cytosol	21.0	44.14
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	20.26	43.43
CDX83558	Canola	plastid	47.4	43.29
GSMUA_Achr4P07690_001	Banana	cytosol	13.75	43.27
Bra021082.1-P	Field mustard	cytosol	43.87	43.22
Solyc01g105880.2.1	Tomato	mitochondrion, plastid	47.4	43.22
CDY13587	Canola	plastid	47.21	43.12
CDX76827	Canola	plastid	44.8	43.11
Bra000727.1-P	Field mustard	plastid	40.52	42.83
AT4G16730.1	Thale cress	cytosol	42.75	42.67
CDX90785	Canola	plastid	47.03	42.66
Solyc01g105870.2.1	Tomato	plastid	47.77	42.34
AT4G16740.1	Thale cress	mitochondrion	44.42	42.3
AT3G25820.1	Thale cress	plastid	46.84	42.0
AT3G25830.1	Thale cress	plastid	46.84	42.0
AT3G25810.1	Thale cress	plastid	46.28	41.64
CDY54750	Canola	cytosol	30.86	41.4
Bra038504.1-P	Field mustard	plastid	41.26	41.34
CDX83560	Canola	plastid	43.31	41.24
CDY62515	Canola	cytosol	30.67	41.15
Solyc01g105890.2.1	Tomato	plastid	46.47	41.05
CDY13589	Canola	plastid	41.26	39.86
AT2G24210.1	Thale cress	plastid	43.68	39.76
CDY21487	Canola	plastid	42.57	38.49
Bra000568.1-P	Field mustard	plastid	42.57	38.49
CDX83208	Canola	plastid	42.38	38.32
KRH22502	Soybean	cytosol	12.08	37.14
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	46.28	36.46
Solyc01g105950.2.1	Tomato	extracellular	10.22	36.18
Solyc03g007730.1.1	Tomato	cytosol	35.87	34.34
Solyc02g079890.1.1	Tomato	cytosol, plastid	34.76	34.19
Solyc01g101220.1.1	Tomato	cytosol	10.59	33.93
Solyc01g101190.2.1	Tomato	cytosol	34.2	33.33
CDY68788	Canola	endoplasmic reticulum, golgi	25.46	32.62
Solyc05g026590.1.1	Tomato	cytosol	16.36	30.66
CDY12909	Canola	cytosol	12.27	28.45
Solyc10g005390.2.1	Tomato	cytosol	29.74	28.42
Solyc10g005420.1.1	Tomato	cytosol	4.09	26.83
Bra027079.1-P	Field mustard	plastid	15.24	24.62
Solyc10g005410.2.1	Tomato	plastid	28.62	24.48
Bra025164.1-P	Field mustard	cytosol	46.28	23.45
CDY61957	Canola	plastid	16.17	23.02
CDY12910	Canola	plastid	5.58	20.13

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ncoils:Coil	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:K4B9K5	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576	EnsemblPlantsGene:Solyc02g079840.1
EnsemblPlants:Solyc02g079840.1.1	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0002768C17	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:44253485..44256030

Molecular Weight (calculated)

64225.3 Da

IEP (calculated)

5.936

GRAVY (calculated)

-0.511

Length

538 amino acids

Sequence
(BLAST)

001: MDIRRSGNYK PSIWEDGYVQ SRPNLYAEEK YCERAEKLKE EVRKMLQKRM TNSLEQLELV DILQRLGIYY HFEEEIDTVL KQIYVNYNKR DHHNEELYDT
101: ALEFRLLRQH GYHLPQEIFC SFMNEEGKFK TALVEDTKGL LSLYEASYLC MEDENIMENA RDFATHYLME NVKKKMDEQV SHALEMPVHW RMERLEARWF
201: IEIYHKKENM NPLLLELAKL DYNMVQATYL EELKQMSRWD KNMKLVKKMS FVRDRLVEGF FWAVGFTPNP QFGYCRKLST KLSVLLTTID DIYDVYGTLD
301: ELELFTDIVD RWDINAIEQL PEYMKISFLA LFNSMNELAY DILKEQGFSI ISHIRKQWAN LCKAYLLEVK WYQRGYTPSL DEFLRNAWIT NTGPVLIMHA
401: YFCITNPIKE DELQRLNHYP AIIYSPSLIL RLANDLATSP DEIKKGDYLK SIQCYMHDSK SCEENARNYI KKLIDETWKK MNRDILRDES LSKDFRRTSM
501: NLARIAQCMY QHGDGFGIPD RETKDRILSL FFQPIPLT

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.