Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT3G25820.1 | Thale cress | plastid | 78.26 | 78.0 |
AT3G25830.1 | Thale cress | plastid | 78.26 | 78.0 |
CDX83560 | Canola | plastid | 70.57 | 74.69 |
CDY13589 | Canola | plastid | 68.9 | 73.97 |
CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 72.91 | 63.84 |
AT2G24210.1 | Thale cress | plastid | 61.54 | 62.27 |
VIT_13s0067g03770.t01 | Wine grape | cytosol | 33.11 | 57.06 |
AT4G16740.1 | Thale cress | mitochondrion | 53.18 | 56.28 |
VIT_13s0067g00090.t01 | Wine grape | cytosol | 32.27 | 55.14 |
VIT_13s0067g00300.t01 | Wine grape | cytosol | 14.55 | 55.06 |
VIT_13s0067g00320.t01 | Wine grape | cytosol | 10.54 | 53.39 |
AT4G16730.1 | Thale cress | cytosol | 46.99 | 52.13 |
VIT_00s2271g00010.t01 | Wine grape | cytosol | 32.94 | 49.87 |
VIT_00s0724g00010.t01 | Wine grape | cytosol | 35.45 | 49.65 |
VIT_13s0067g03700.t01 | Wine grape | cytosol | 46.15 | 48.76 |
VIT_13s0084g00010.t01 | Wine grape | cytosol | 44.48 | 48.28 |
VIT_13s0067g03740.t01 | Wine grape | cytosol | 33.95 | 48.1 |
Solyc02g079840.1.1 | Tomato | cytosol | 41.64 | 46.28 |
VIT_13s0067g00370.t01 | Wine grape | plastid | 44.31 | 44.92 |
GSMUA_Achr4P07690_001 | Banana | cytosol | 12.71 | 44.44 |
VIT_13s0067g00130.t01 | Wine grape | plastid | 38.46 | 44.15 |
PGSC0003DMT400089009 | Potato | cytosol | 11.87 | 44.1 |
VIT_13s0067g03790.t01 | Wine grape | plastid | 42.98 | 43.34 |
VIT_13s0019g00060.t01 | Wine grape | plastid | 42.98 | 43.27 |
Bra025164.1-P | Field mustard | cytosol | 72.91 | 41.05 |
VIT_13s0067g03830.t01 | Wine grape | plastid | 28.6 | 38.86 |
PGSC0003DMT400055897 | Potato | cytosol | 7.36 | 36.36 |
KRH22502 | Soybean | cytosol | 9.2 | 31.43 |
AT1G61680.1 | Thale cress | plastid | 27.59 | 29.0 |
AT5G48110.1 | Thale cress | plastid | 15.89 | 28.02 |
AT1G70080.1 | Thale cress | mitochondrion | 27.42 | 26.84 |
AT3G14520.1 | Thale cress | plastid | 26.09 | 25.79 |
AT3G14490.1 | Thale cress | plastid | 25.75 | 25.62 |
AT3G14540.1 | Thale cress | plastid | 25.25 | 25.08 |
AT3G29410.1 | Thale cress | plastid | 25.08 | 24.88 |
AT5G44630.1 | Thale cress | cytosol | 23.08 | 24.78 |
AT3G29110.1 | Thale cress | plastid | 24.25 | 24.37 |
AT4G13280.2 | Thale cress | cytosol | 22.41 | 24.19 |
AT3G29190.1 | Thale cress | plastid | 24.25 | 24.13 |
AT3G32030.1 | Thale cress | plastid | 24.25 | 24.01 |
AT4G13300.1 | Thale cress | cytosol | 22.07 | 23.83 |
AT1G66020.1 | Thale cress | plastid | 23.58 | 23.58 |
AT1G31950.3 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole | 23.91 | 23.52 |
AT4G20210.1 | Thale cress | plastid | 23.58 | 23.5 |
AT4G15870.1 | Thale cress | plastid | 23.41 | 23.41 |
AT1G48820.1 | Thale cress | mitochondrion, plastid | 21.91 | 23.35 |
AT4G20230.2 | Thale cress | plastid | 24.08 | 23.26 |
AT1G33750.1 | Thale cress | mitochondrion, plastid | 22.91 | 22.72 |
AT4G20200.1 | Thale cress | plastid | 22.91 | 22.68 |
AT2G23230.2 | Thale cress | plastid | 22.74 | 22.26 |
AT1G48800.1 | Thale cress | mitochondrion, plastid | 21.74 | 21.56 |
Protein Annotations
Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | EntrezGene:822173 | MapMan:9.1.4.2 | ProteinID:AEE77072.1 | EMBL:AF497484 |
ArrayExpress:AT3G25810 | EnsemblPlantsGene:AT3G25810 | RefSeq:AT3G25810 | TAIR:AT3G25810 | RefSeq:AT3G25810-TAIR-G | EnsemblPlants:AT3G25810.1 |
TAIR:AT3G25810.1 | Unigene:At.37322 | ProteinID:BAA95770.1 | EMBL:BT053763 | GO:GO:0000287 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 |
GO:GO:0009536 | GO:GO:0009987 | GO:GO:0010333 | GO:GO:0010334 | GO:GO:0016114 | GO:GO:0016829 |
GO:GO:0034002 | GO:GO:0034768 | GO:GO:0043693 | GO:GO:0046872 | GO:GO:0050550 | GO:GO:0050551 |
GO:GO:0050552 | GO:GO:0080015 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | RefSeq:NP_189209.2 |
PFAM:PF01397 | PFAM:PF03936 | PO:PO:0000084 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009029 |
PO:PO:0009031 | PO:PO:0009032 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF16 |
UniProt:Q9LRZ6 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf |
InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI00000A4CD3 | SEG:seg | : | : |
Description
TPS24Beta-myrcene/(E)-beta-ocimene synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ6]
Coordinates
chr3:+:9430762..9434000
Molecular Weight (calculated)
69815.8 Da
IEP (calculated)
6.122
GRAVY (calculated)
-0.326
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLCIGSAP IYQNACIHNF RLQRPRRFIS KSMTKTMPDA NPLDLRRRSG NYQPSSWDHS YLLSIENKYV NEKEVITRHV LKKKVKKMLE EVETKSRLEK
101: LELIDDLQKL GVSYHFEQEI NNILTNFHLE NGKNIWKCDK EEDLHATALE FRLLRQHGFG VSEDIFDVII DKIESNTFKS DNITSIITLY EASYLSTKSD
201: TKLHKVIRPF ATEQIRNFVD DESETYNIML REMAIHALEI PYHWRMRRLE TRWYIDAYEK KHDMNLFLAE FAKIDFNIVQ TAHQEDVKYV SCWWKETGLG
301: SQLHFVRDRI VENYFWTVGM IYEPQFGYIR RIVAIVAALI TVIDDIYDIY GTPEELELFT AMVQNWDINR LDELPEYMKL CFLTLFNEIN AMGCDVLKCK
401: NIDVIPYFKK SWADLCKAYL VEAKWYKGGY KPSVEEYMQN AWISISAPTM LIHFYCAFSG QISVQILESL VQQQQDVVRC SATVLRLAND LATSPDELAR
501: GDVLKSVQCY MHETGVSEEE ARTHVQQMIS HTWDEMNYEA RTAARSSSLL SRRFVETAMN LARMSQCMYQ HGDGHGCPDK AKIVDRVQTL LVDPIPLD
101: LELIDDLQKL GVSYHFEQEI NNILTNFHLE NGKNIWKCDK EEDLHATALE FRLLRQHGFG VSEDIFDVII DKIESNTFKS DNITSIITLY EASYLSTKSD
201: TKLHKVIRPF ATEQIRNFVD DESETYNIML REMAIHALEI PYHWRMRRLE TRWYIDAYEK KHDMNLFLAE FAKIDFNIVQ TAHQEDVKYV SCWWKETGLG
301: SQLHFVRDRI VENYFWTVGM IYEPQFGYIR RIVAIVAALI TVIDDIYDIY GTPEELELFT AMVQNWDINR LDELPEYMKL CFLTLFNEIN AMGCDVLKCK
401: NIDVIPYFKK SWADLCKAYL VEAKWYKGGY KPSVEEYMQN AWISISAPTM LIHFYCAFSG QISVQILESL VQQQQDVVRC SATVLRLAND LATSPDELAR
501: GDVLKSVQCY MHETGVSEEE ARTHVQQMIS HTWDEMNYEA RTAARSSSLL SRRFVETAMN LARMSQCMYQ HGDGHGCPDK AKIVDRVQTL LVDPIPLD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.