Factsheet for AT4G16740.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53648	Canola	cytosol	38.05	83.98
CDY53129	Canola	cytosol	38.05	83.98
CDY68676	Canola	cytosol	54.16	81.38
Bra021082.1-P	Field mustard	cytosol	78.58	81.32
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	33.81	76.1
AT4G16730.1	Thale cress	cytosol	56.46	59.18
AT3G25830.1	Thale cress	plastid	57.17	53.83
AT3G25820.1	Thale cress	plastid	57.17	53.83
VIT_13s0067g00300.t01	Wine grape	cytosol	15.04	53.8
AT3G25810.1	Thale cress	plastid	56.28	53.18
PGSC0003DMT400089009	Potato	cytosol	14.87	52.17
AT2G24210.1	Thale cress	plastid	52.74	50.42
VIT_13s0067g03770.t01	Wine grape	cytosol	30.8	50.14
VIT_13s0067g00090.t01	Wine grape	cytosol	30.97	50.0
VIT_00s0724g00010.t01	Wine grape	cytosol	35.75	47.31
VIT_00s2271g00010.t01	Wine grape	cytosol	32.92	47.09
VIT_13s0067g03700.t01	Wine grape	cytosol	46.73	46.64
VIT_13s0067g00320.t01	Wine grape	cytosol	9.73	46.61
VIT_13s0067g03740.t01	Wine grape	cytosol	34.16	45.73
VIT_13s0084g00010.t01	Wine grape	cytosol	44.25	45.37
Solyc02g079840.1.1	Tomato	cytosol	42.3	44.42
PGSC0003DMT400055897	Potato	cytosol	9.38	43.8
VIT_13s0067g00130.t01	Wine grape	plastid	39.82	43.19
VIT_13s0067g00370.t01	Wine grape	plastid	44.6	42.71
VIT_13s0067g03790.t01	Wine grape	plastid	44.6	42.5
VIT_13s0019g00060.t01	Wine grape	plastid	44.42	42.26
VIT_13s0067g03830.t01	Wine grape	plastid	32.39	41.59
GSMUA_Achr4P07690_001	Banana	cytosol	12.39	40.94
KRH22502	Soybean	cytosol	10.09	32.57
AT1G61680.1	Thale cress	plastid	29.03	28.82
AT5G48110.1	Thale cress	plastid	16.28	27.14
AT1G70080.1	Thale cress	mitochondrion	27.43	25.37
AT1G33750.1	Thale cress	mitochondrion, plastid	26.73	25.04
AT3G14490.1	Thale cress	plastid	26.02	24.46
AT5G44630.1	Thale cress	cytosol	24.07	24.42
AT4G15870.1	Thale cress	plastid	25.31	23.91
AT2G23230.2	Thale cress	plastid	25.66	23.73
AT3G29410.1	Thale cress	plastid	25.31	23.71
AT4G13300.1	Thale cress	cytosol	23.19	23.65
AT4G13280.2	Thale cress	cytosol	23.01	23.47
AT1G48820.1	Thale cress	mitochondrion, plastid	23.19	23.35
AT3G14520.1	Thale cress	plastid	24.42	22.81
AT3G29110.1	Thale cress	plastid	23.89	22.69
AT3G14540.1	Thale cress	plastid	23.89	22.43
AT1G66020.1	Thale cress	plastid	23.72	22.41
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	23.72	22.04
AT3G32030.1	Thale cress	plastid	23.54	22.02
AT3G29190.1	Thale cress	plastid	23.19	21.8
AT4G20200.1	Thale cress	plastid	23.19	21.69
AT4G20210.1	Thale cress	plastid	22.83	21.5
AT1G48800.1	Thale cress	mitochondrion, plastid	22.48	21.06
AT4G20230.2	Thale cress	plastid	23.01	21.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:827377	MapMan:9.1.4.2	UniProt:A4FVP2	ProteinID:AEE83793.1
ProteinID:AEE83794.1	EMBL:AF180366	EMBL:AK118969	ArrayExpress:AT4G16740	EnsemblPlantsGene:AT4G16740	RefSeq:AT4G16740
TAIR:AT4G16740	RefSeq:AT4G16740-TAIR-G	EnsemblPlants:AT4G16740.1	TAIR:AT4G16740.1	Symbol:ATTPS03	EMBL:AY085646
EMBL:AY151086	EMBL:BT030340	ProteinID:CAB10449.1	ProteinID:CAB78716.1	ncoils:Coil	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006629	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009605	GO:GO:0009607
GO:GO:0009611	GO:GO:0009625	GO:GO:0009719	GO:GO:0009753	GO:GO:0009987	GO:GO:0010333
GO:GO:0016106	GO:GO:0016114	GO:GO:0016829	GO:GO:0034768	GO:GO:0046872	GO:GO:0050551
GO:GO:0052578	GO:GO:0080027	GO:GO:0102701	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
RefSeq:NP_001031651.1	RefSeq:NP_567511.3	PFAM:PF01397	PFAM:PF03936	PO:PO:0000293	PO:PO:0007611
PO:PO:0007616	PO:PO:0009029	PO:PO:0009031	PO:PO:0009046	PO:PO:0009047	PO:PO:0025022
PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000034F0A5	SEG:seg	:

Description

TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]

Coordinates

chr4:+:9407611..9411140

Molecular Weight (calculated)

65756.9 Da

IEP (calculated)

7.661

GRAVY (calculated)

-0.403

Length

565 amino acids

Sequence
(BLAST)

001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.