Factsheet for AT3G29190.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G20200.1	Thale cress	plastid	65.89	65.56
AT1G66020.1	Thale cress	plastid	64.89	65.22
AT4G20230.2	Thale cress	plastid	64.56	62.68
Bra020921.1-P	Field mustard	cytosol	41.43	61.48
CDX76457	Canola	plastid	61.4	61.4
CDY54565	Canola	plastid	58.24	60.87
AT4G20210.1	Thale cress	plastid	57.4	57.5
AT3G29110.1	Thale cress	plastid	54.24	54.79
AT1G48800.1	Thale cress	mitochondrion, plastid	52.08	51.91
AT1G48820.1	Thale cress	mitochondrion, plastid	47.75	51.16
AT4G15870.1	Thale cress	plastid	50.58	50.84
AT5G44630.1	Thale cress	cytosol	44.43	47.94
AT4G13280.2	Thale cress	cytosol	43.76	47.47
AT4G13300.1	Thale cress	cytosol	43.59	47.29
AT2G23230.2	Thale cress	plastid	47.59	46.81
AT1G70080.1	Thale cress	mitochondrion	43.59	42.88
AT5G48110.1	Thale cress	plastid	23.29	41.3
AT3G14490.1	Thale cress	plastid	37.44	37.44
PGSC0003DMT400050941	Potato	cytosol	15.47	37.2
AT3G14520.1	Thale cress	plastid	36.94	36.69
PGSC0003DMT400075074	Potato	cytosol	12.65	36.54
AT3G32030.1	Thale cress	plastid	36.27	36.09
AT1G33750.1	Thale cress	mitochondrion, plastid	36.11	35.99
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	36.11	35.69
AT3G14540.1	Thale cress	plastid	35.44	35.38
VIT_18s0001g04200.t01	Wine grape	cytosol	6.82	34.45
AT3G29410.1	Thale cress	plastid	34.28	34.16
PGSC0003DMT400070310	Potato	cytosol	17.64	34.08
PGSC0003DMT400079785	Potato	cytosol	16.81	32.48
Solyc01g101190.2.1	Tomato	cytosol	29.12	31.7
Solyc01g101220.1.1	Tomato	cytosol	8.82	31.55
PGSC0003DMT400047124	Potato	cytosol	15.81	30.55
Os02t0458100-01	Rice	plastid	17.14	26.34
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	13.14	25.48
VIT_18s0001g04510.t01	Wine grape	plastid	12.65	24.84
AT4G16730.1	Thale cress	cytosol	22.13	24.68
AT3G25810.1	Thale cress	plastid	24.13	24.25
AT3G25820.1	Thale cress	plastid	23.96	24.0
AT3G25830.1	Thale cress	plastid	23.96	24.0
AT4G16740.1	Thale cress	mitochondrion	21.8	23.19
GSMUA_Achr6P24330_001	Banana	cytosol	5.32	22.7
AT2G24210.1	Thale cress	plastid	22.3	22.67
KRG93110	Soybean	mitochondrion	10.98	22.3
AT1G61680.1	Thale cress	plastid	20.47	21.62
GSMUA_Achr6P24340_001	Banana	cytosol	5.16	20.81
VIT_18s0001g05430.t01	Wine grape	cytosol	15.14	18.88

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:822572	MapMan:9.1.4.2	ProteinID:AEE77550.1	ArrayExpress:AT3G29190
EnsemblPlantsGene:AT3G29190	RefSeq:AT3G29190	TAIR:AT3G29190	RefSeq:AT3G29190-TAIR-G	EnsemblPlants:AT3G29190.1	TAIR:AT3G29190.1
Unigene:At.53561	ProteinID:BAB01815.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010333	GO:GO:0016114	GO:GO:0016829
GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_189564.2	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31045	PANTHER:PTHR31045:SF4	UniProt:Q9LS76	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00017392BD
SEG:seg	:	:	:	:	:

Description

TPS15Terpenoid synthase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS76]

Coordinates

chr3:-:11159192..11163336

Molecular Weight (calculated)

69671.6 Da

IEP (calculated)

6.925

GRAVY (calculated)

-0.218

Length

601 amino acids

Sequence
(BLAST)

001: MEVISIFGPK HGSLISLHSS YNLFKVSKVT RFRRTLFPSN HAKVFRFKAL TCDNQESNNM FKELPTSEWT HHFHSIQVDV SEMDAIRIEI DALKPKVKNI
101: LMSFQGIDST KKRILMIYML ISLGLACQFE EEIYETLKEG FGKIEEMMAN EEDLYTVSII FWVFRRYGHY ISSDFFRRFK GNDGNFKKSL IGDAKGMLSF
201: YEAANMATTK DYILDEALSF TSSHLESLAA NGACPPHMSR RIRNALNASQ HWNMEMLVAV EYISFYEKEK DHNEMLLKFS KLNFKFLQLQ YLQELKVLTK
301: WYKEVDFVSK LPPYFRDRIV ENHFFIQTLF VESQHSRARI MMAKYFILLV IQDDTLDRYA SLPEAESLVN SLNRWAPDHA MDKQPDYLKF VFKFILDTFE
401: EFEKELRPEG GSFGVCATIE EFKSLVKANL EAEKWALADN MPSFEEYIEV TGVGITAMTT LMGAMMCMGK IVPKEDYKWL KSRPKIIQAL AIKGRLMNDM
501: KGYKEDMSRG YAANAVTCYM KQYRVTEQEA LKEFEKMVAV ANKTVNEEFL TTMGVSRLVL KLAMGVGLMI SITYSEDEGY THPEGKIKEK MTTLFVDQIP
601: L

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.