Factsheet for Bra020921.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76457	Canola	plastid	98.52	66.39
Bra012513.1-P	Field mustard	cytosol	60.74	51.79
AT4G20230.2	Thale cress	plastid	64.69	42.33
Bra020953.1-P	Field mustard	plastid	63.46	42.13
AT3G29190.1	Thale cress	plastid	61.48	41.43
Bra012515.1-P	Field mustard	extracellular	22.22	36.44
Bra027931.1-P	Field mustard	plastid	52.35	35.27
PGSC0003DMT400075074	Potato	cytosol	18.02	35.1
Bra027609.1-P	Field mustard	cytosol	24.94	35.07
Bra002714.1-P	Field mustard	plastid	50.86	34.97
PGSC0003DMT400070310	Potato	cytosol	25.19	32.8
Bra002165.1-P	Field mustard	cytosol	43.46	31.65
PGSC0003DMT400079785	Potato	cytosol	24.2	31.51
Bra021566.1-P	Field mustard	plastid	39.26	31.3
Bra028251.1-P	Field mustard	cytosol	42.96	31.24
Solyc01g101220.1.1	Tomato	cytosol	12.84	30.95
Bra039519.1-P	Field mustard	cytosol	41.23	29.98
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	39.01	28.26
VIT_18s0001g04200.t01	Wine grape	cytosol	7.9	26.89
Bra001555.1-P	Field mustard	plastid	39.75	26.48
Bra021560.1-P	Field mustard	plastid	39.01	26.25
Bra001557.1-P	Field mustard	plastid	39.01	26.16
PGSC0003DMT400050941	Potato	cytosol	15.8	25.6
Bra012955.1-P	Field mustard	plastid	36.54	24.71
Bra021564.1-P	Field mustard	plastid	36.54	24.54
Solyc01g101190.2.1	Tomato	cytosol	33.33	24.46
Bra002968.1-P	Field mustard	plastid	23.21	24.35
Bra035927.1-P	Field mustard	mitochondrion, plastid	33.58	23.94
GSMUA_Achr6P24330_001	Banana	cytosol	7.41	21.28
PGSC0003DMT400047124	Potato	cytosol	15.56	20.26
GSMUA_Achr6P24340_001	Banana	cytosol	7.41	20.13
Bra025163.1-P	Field mustard	cytosol	24.44	17.68
Bra000727.1-P	Field mustard	plastid	21.98	17.49
Bra021082.1-P	Field mustard	cytosol	22.96	17.03
Os02t0458100-01	Rice	plastid	16.3	16.88
Bra000568.1-P	Field mustard	plastid	24.2	16.47
Bra038504.1-P	Field mustard	plastid	21.73	16.39
Bra027079.1-P	Field mustard	plastid	12.84	15.62
KRG93110	Soybean	mitochondrion	10.12	13.85
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	9.63	12.58
VIT_18s0001g04510.t01	Wine grape	plastid	8.64	11.44
VIT_18s0001g05430.t01	Wine grape	cytosol	12.1	10.17
Bra025164.1-P	Field mustard	cytosol	24.44	9.32

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra020921	EnsemblPlants:Bra020921.1	EnsemblPlants:Bra020921.1-P
ncoils:Coil	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4DWM7	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002545A15	:	:	:	:

Description

AT4G20200 (E=5e-159) | terpene synthase/cyclase family protein

Coordinates

chrA08:+:11195908..11197868

Molecular Weight (calculated)

47070.8 Da

IEP (calculated)

4.974

GRAVY (calculated)

-0.165

Length

405 amino acids

Sequence
(BLAST)

001: MLSLYEAAHL RTRKDNILDE ALMFTSSHLK SIAACGTCPP HLSMRIQSAL ILSQHWNMEI LVPLEFIPFY EQEKDHDEMV LKFAKISLKF LQLQYLQELK
101: IVTKWYNELG HASNLPPYYR DRIVENYFFV LSVFIEPQLS RARMMLTQFF TALQILDDTF DRYAFLPEAE ILANSLKRWA PDHDMDKQPD YLKFVLDSTL
201: NILEELEREV RKTEGSSYSF DATKDEVDKL VKANFDLAKW ALVAHVPSFE EYMEVGEVEF TAYALLAGIF MTKGKIAKEA YEWLKVRPKL FQCLSIKGRL
301: RNDITGYEDD MSRGNVTNAV TCYMKQYGVP VEEAIRELNK IVADADKTIN EELLTTVDVE RFVLKVAIDF ARMITVTYNV DEGFTHPEGK IKDYMTSLFL
401: DQIRL

Best Arabidopsis Sequence Match ( AT4G20200.1 )
(BLAST)

001: MEATSVFWPK LGSQIFLSSS TNLWPLSKLY GFHLTSFPSK PLKHIRLKAT NTLTFDDQER IRKFKKLPTS EWTHYGHSIS IDVSEMDALR KEIDALKPIL
101: KSTLMSFKGI DSTKKRILMI YLLVSLGLAY HFEEEIYETL KMSFENIDKM MDGEDDLYTV SIIFWVFRRH GYHISYGVFQ RFKGSNGNFK ESLTRDAKGM
201: LSLYEAANLG TTKDFILEEA LSFTSSHLES LAASGTCPPH LSVRIRNALG LSQHWNMEML VPVEFIPFYE QEIEHDEMLL KFAKLSFKLG QLQYLQELKT
301: LTKWYKELDF ATNLPPYFRD RIVEHHFLVQ AVFFSPQLSR ERIMMIQYFT GLALLDDTFD RYASLHEAES LANSLERWAP DQAMDKQPDY LRFVLNFILD
401: TFEEFKRELG PEERSYSVNA TIEEFKAAAK ANIDLEKWAQ ADHIPSFEEY MEVGEVEVTV YASLAGIFMS MGKMATKEAF EWLKSRPKLV QYLSIKGRLM
501: NDLMGYEDDM SRGYVTNAVN CYMKQYGVTK EEAFRELYKI VVAANKTLNE EFLSTTGVPH FLLKATIDLA RMMTVAYNVN EGFTNPQGKI KEYMTSMFVD
601: QIHI

Arabidopsis Description

TPS07Putative terpenoid synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:O65434]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.