Factsheet for Bra038504.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54750	Canola	cytosol	65.36	87.53
CDY62515	Canola	cytosol	63.13	84.54
AT4G16730.1	Thale cress	cytosol	72.44	72.17
Bra021082.1-P	Field mustard	cytosol	52.7	51.83
VIT_13s0067g00300.t01	Wine grape	cytosol	15.08	51.27
Bra000727.1-P	Field mustard	plastid	47.3	49.9
Bra025163.1-P	Field mustard	cytosol	48.04	46.07
PGSC0003DMT400089009	Potato	cytosol	13.59	45.34
Bra000568.1-P	Field mustard	plastid	48.6	43.87
VIT_00s2271g00010.t01	Wine grape	cytosol	32.22	43.8
VIT_00s0724g00010.t01	Wine grape	cytosol	34.45	43.33
VIT_13s0067g00320.t01	Wine grape	cytosol	9.31	42.37
PGSC0003DMT400055897	Potato	cytosol	9.5	42.15
VIT_13s0067g00090.t01	Wine grape	cytosol	27.19	41.71
Solyc02g079840.1.1	Tomato	cytosol	41.34	41.26
VIT_13s0067g03770.t01	Wine grape	cytosol	26.63	41.21
VIT_13s0084g00010.t01	Wine grape	cytosol	41.9	40.83
VIT_13s0067g03700.t01	Wine grape	cytosol	41.15	39.05
VIT_13s0067g03830.t01	Wine grape	plastid	31.84	38.86
VIT_13s0067g00130.t01	Wine grape	plastid	37.43	38.58
VIT_13s0067g00370.t01	Wine grape	plastid	42.27	38.47
VIT_13s0067g03740.t01	Wine grape	cytosol	29.61	37.68
VIT_13s0067g03790.t01	Wine grape	plastid	40.41	36.59
VIT_13s0019g00060.t01	Wine grape	plastid	40.04	36.2
GSMUA_Achr4P07690_001	Banana	cytosol	10.24	32.16
KRH22502	Soybean	cytosol	9.68	29.71
Bra027609.1-P	Field mustard	cytosol	14.53	27.08
Bra025164.1-P	Field mustard	cytosol	51.58	26.08
Bra012515.1-P	Field mustard	extracellular	11.55	25.1
Bra035927.1-P	Field mustard	mitochondrion, plastid	25.51	24.12
Bra021566.1-P	Field mustard	plastid	22.72	24.02
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	24.95	23.97
Bra027079.1-P	Field mustard	plastid	14.71	23.72
Bra012955.1-P	Field mustard	plastid	26.07	23.37
Bra021560.1-P	Field mustard	plastid	25.7	22.92
Bra027931.1-P	Field mustard	plastid	25.33	22.63
Bra021564.1-P	Field mustard	plastid	24.95	22.22
Bra002165.1-P	Field mustard	cytosol	22.91	22.12
Bra012513.1-P	Field mustard	cytosol	19.37	21.89
Bra020921.1-P	Field mustard	cytosol	16.39	21.73
Bra001557.1-P	Field mustard	plastid	24.39	21.69
Bra002714.1-P	Field mustard	plastid	23.46	21.39
Bra001555.1-P	Field mustard	plastid	24.21	21.38
Bra039519.1-P	Field mustard	cytosol	21.23	20.47
Bra020953.1-P	Field mustard	plastid	22.91	20.16
Bra028251.1-P	Field mustard	cytosol	20.86	20.11
Bra002968.1-P	Field mustard	plastid	14.34	19.95

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra038504	EnsemblPlants:Bra038504.1	EnsemblPlants:Bra038504.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4FBN8
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00025444EF	:

Description

AT4G16730 (E=1e-162) | lyase/ magnesium ion binding

Coordinates

chrA01:-:10802845..10806311

Molecular Weight (calculated)

62406.5 Da

IEP (calculated)

6.089

GRAVY (calculated)

-0.288

Length

537 amino acids

Sequence
(BLAST)

001: MATHDISFSS AFVCNALHQK SEHFLCNTVS KVTSAQAVTV RRRSANYCPS LWDHQYLLSL ENIYAKEVES TEKAKLLKEE VRETLVKTQG SLEQLEMIDS
101: LQRLGISYHY KHEIHDILKR IYEQHHEIGR ESPDLHATAL GFFLLRQHSF DVSQDDFDIF KSENGIFRKT LPIKGVLSLY EASYFSMDSE FKLKEARCFA
201: NERLTEFIAE NSTTILGTNE TYILDMVKRA LVNPYHWSTR RIEARWYIDV YRKKHDMDPL LLKFAALDFN ILQANHQEEL KLISSWWNST GLMKQLDFVR
301: DRITESYFWT IGIFYEPEFK YYRKILTKLF MLIAIMDDIY DIYGTLEELE IFTNVVERWD VNLVERLPEY MQICFLFLYN EINQIGYDVL RDKGRNIIPY
401: LKQVISDQNL TDVSKNHHSI VRSSATILRL ANDLATSTEE MARGDSPKSV QCYMYETGAK EDAAREQMQS MIIDSWDVIN SAAHTSSLPS GFVAAAANLN
501: RVVQCIYQHG DGHGCPEKAK IVDHIQSVLF NPVPFQM

Best Arabidopsis Sequence Match ( AT4G16730.1 )
(BLAST)

001: MGSSISPLAR EYIYVKEVET AEKAILFKEE VRKTLNEIEG SIEQLEMIDS LQRLGISYHY KHEIHDILRK IHDQHGEIER ETQDLHATSL EFILLRQHGF
101: DVSQDAFDVF ISETGEFRKT LHSDIKGLLS LYEASYFSMD SEFKLKETRI YANKRLSEFV AESSKTICRE DETYILEMVK RALETPYHWS IRRLEARWYI
201: NVYEKKHEMN PLLLEFAAID FNMLQANHQE ELKLISSWWN STGLMKQLDF VRDRITESYF WTIGIFYEPE FKYCRKILTK IFMLIVIMDD IYDIYGTLEE
301: LELFTNVVEK WDVNHVERLP NYMRMCFLFL YNEINQIGYD VLRDKGLNVI PYLKQVWTDL FKTFLTESKW YKTGHKPSFE EYMQNGVISS SVPTILLHLF
401: SVLSDHISDQ TLTDDSKNHS VVRSCATILR LANDLATSTE EMARGDSPKS VQCYMYETRA SEEEARRHMQ SMISDSWDII NSDLKTAHTS SLPRGFLAAA
501: ANLNRVVQCI YRHGDGHGSP EKTKTVDYIQ SVLFNPVPL

Arabidopsis Description

TPS02terpene synthase 02 [Source:TAIR;Acc:AT4G16730]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.