Factsheet for Bra020953.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09325	Canola	plastid	39.84	90.0
CDY09324	Canola	plastid	86.07	87.65
AT1G66020.1	Thale cress	plastid	63.77	65.05
AT4G20200.1	Thale cress	plastid	63.61	64.24
Bra020921.1-P	Field mustard	cytosol	42.13	63.46
Bra012515.1-P	Field mustard	extracellular	25.25	62.35
Bra027609.1-P	Field mustard	cytosol	29.02	61.46
Bra012513.1-P	Field mustard	cytosol	45.08	57.89
Bra002714.1-P	Field mustard	plastid	51.31	53.14
Bra027931.1-P	Field mustard	plastid	52.3	53.08
Bra002968.1-P	Field mustard	plastid	32.79	51.81
Bra002165.1-P	Field mustard	cytosol	41.64	45.68
Bra028251.1-P	Field mustard	cytosol	41.31	45.24
Bra039519.1-P	Field mustard	cytosol	40.0	43.81
VIT_18s0001g04200.t01	Wine grape	cytosol	8.2	42.02
PGSC0003DMT400050941	Potato	cytosol	15.9	38.8
Bra001557.1-P	Field mustard	plastid	35.9	36.26
PGSC0003DMT400075074	Potato	cytosol	12.3	36.06
Bra021566.1-P	Field mustard	plastid	30.0	36.02
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	32.79	35.78
Bra001555.1-P	Field mustard	plastid	35.41	35.53
Bra012955.1-P	Field mustard	plastid	33.93	34.56
Bra021560.1-P	Field mustard	plastid	33.77	34.22
Bra035927.1-P	Field mustard	mitochondrion, plastid	31.31	33.63
Bra021564.1-P	Field mustard	plastid	32.62	33.0
Solyc01g101190.2.1	Tomato	cytosol	29.34	32.43
Solyc01g101220.1.1	Tomato	cytosol	8.85	32.14
PGSC0003DMT400070310	Potato	cytosol	16.07	31.51
PGSC0003DMT400079785	Potato	cytosol	15.41	30.23
PGSC0003DMT400047124	Potato	cytosol	15.25	29.9
Os02t0458100-01	Rice	plastid	18.2	28.39
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.43	28.39
VIT_18s0001g04510.t01	Wine grape	plastid	13.77	27.45
Bra025163.1-P	Field mustard	cytosol	23.11	25.18
Bra000727.1-P	Field mustard	plastid	20.49	24.56
Bra000568.1-P	Field mustard	plastid	22.46	23.03
Bra038504.1-P	Field mustard	plastid	20.16	22.91
Bra021082.1-P	Field mustard	cytosol	20.0	22.34
KRG93110	Soybean	mitochondrion	10.82	22.3
GSMUA_Achr6P24340_001	Banana	cytosol	5.41	22.15
GSMUA_Achr6P24330_001	Banana	cytosol	5.08	21.99
VIT_18s0001g05430.t01	Wine grape	cytosol	16.72	21.16
Bra027079.1-P	Field mustard	plastid	10.49	19.22
Bra025164.1-P	Field mustard	cytosol	23.44	13.47

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra020953	EnsemblPlants:Bra020953.1	EnsemblPlants:Bra020953.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4DWQ7
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF25	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002545839	SEG:seg

Description

AT4G20200 (E=1e-214) | terpene synthase/cyclase family protein

Coordinates

chrA08:-:11003166..11006073

Molecular Weight (calculated)

70230.6 Da

IEP (calculated)

5.879

GRAVY (calculated)

-0.212

Length

610 amino acids

Sequence
(BLAST)

001: MPHSKMETIA VFGSKLGFNL SLPSRNNLFL PPTIKFNGFP LTSFPDKPRQ HVCLKATTST SSTCDDDQLI NRKFKKLPPS EWTDHFHSVP LDVSEMDALK
101: REIETLKPKV KNMFMSSQGT ERILIIYLLV SLGLAYHFED DIYDTLKVSF TKIEEMMDSE EDLYTVSIIF WVFRTYGHCL SSDVFTRFKE SNGDFKETLK
201: EDPRGILSLY EAAHLRTTKD YILNEALGFT SSHLESLVAC GTCKPHLSMQ IQNALYLSQR WNMEMLVAVK YISFYEQEED HDEMLLRFAK ISFKLLQLQY
301: IQDLKILTNW YKEVDNGSKL PPYFRHIIVQ SHFLIQAVFS VPQLSRARIM LTQYYTILTI IDDTFDRYAS LPEAEILANS LERWSPDPAM DKQPEYLKAV
401: LYFVFDTFDD FEKKLSPGGK PDSLEANIEE FKANVKANFE HAKWAHAAHL PSFEEYMEVA EVVIGVYVVL AGYFICLGKM ATKEAYEWLK SRPRLVKSLS
501: VRGRLMNDIT GLEDDMSRGQ ITNAVNCYMK QYGVTKQDAL RELHKMVADT DNIINEELLT TTGVSCLVLK TVMGLAQSIT VCYNGYEGYT RPEGKMKEYM
601: TSLFVDQIRL

Best Arabidopsis Sequence Match ( AT4G20200.1 )
(BLAST)

001: MEATSVFWPK LGSQIFLSSS TNLWPLSKLY GFHLTSFPSK PLKHIRLKAT NTLTFDDQER IRKFKKLPTS EWTHYGHSIS IDVSEMDALR KEIDALKPIL
101: KSTLMSFKGI DSTKKRILMI YLLVSLGLAY HFEEEIYETL KMSFENIDKM MDGEDDLYTV SIIFWVFRRH GYHISYGVFQ RFKGSNGNFK ESLTRDAKGM
201: LSLYEAANLG TTKDFILEEA LSFTSSHLES LAASGTCPPH LSVRIRNALG LSQHWNMEML VPVEFIPFYE QEIEHDEMLL KFAKLSFKLG QLQYLQELKT
301: LTKWYKELDF ATNLPPYFRD RIVEHHFLVQ AVFFSPQLSR ERIMMIQYFT GLALLDDTFD RYASLHEAES LANSLERWAP DQAMDKQPDY LRFVLNFILD
401: TFEEFKRELG PEERSYSVNA TIEEFKAAAK ANIDLEKWAQ ADHIPSFEEY MEVGEVEVTV YASLAGIFMS MGKMATKEAF EWLKSRPKLV QYLSIKGRLM
501: NDLMGYEDDM SRGYVTNAVN CYMKQYGVTK EEAFRELYKI VVAANKTLNE EFLSTTGVPH FLLKATIDLA RMMTVAYNVN EGFTNPQGKI KEYMTSMFVD
601: QIHI

Arabidopsis Description

TPS07Putative terpenoid synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:O65434]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.