Factsheet for Bra025164.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	61.86	96.19
AT3G25820.1	Thale cress	plastid	42.84	75.83
AT3G25830.1	Thale cress	plastid	42.84	75.83
Bra025163.1-P	Field mustard	cytosol	39.64	75.18
AT3G25810.1	Thale cress	plastid	41.05	72.91
Bra000727.1-P	Field mustard	plastid	29.28	61.1
Bra000568.1-P	Field mustard	plastid	33.8	60.34
Bra021082.1-P	Field mustard	cytosol	28.72	55.86
VIT_13s0067g03770.t01	Wine grape	cytosol	17.8	54.47
VIT_13s0067g00300.t01	Wine grape	cytosol	7.91	53.16
VIT_13s0067g00090.t01	Wine grape	cytosol	17.42	52.86
Bra038504.1-P	Field mustard	plastid	26.08	51.58
VIT_00s0724g00010.t01	Wine grape	cytosol	20.34	50.59
VIT_00s2271g00010.t01	Wine grape	cytosol	18.36	49.37
VIT_13s0084g00010.t01	Wine grape	cytosol	24.76	47.73
VIT_13s0067g03740.t01	Wine grape	cytosol	18.93	47.63
VIT_13s0067g03700.t01	Wine grape	cytosol	25.14	47.17
Solyc02g079840.1.1	Tomato	cytosol	23.45	46.28
VIT_13s0067g00320.t01	Wine grape	cytosol	5.08	45.76
PGSC0003DMT400089009	Potato	cytosol	6.78	44.72
VIT_13s0067g00130.t01	Wine grape	plastid	21.75	44.34
VIT_13s0067g00370.t01	Wine grape	plastid	24.39	43.9
GSMUA_Achr4P07690_001	Banana	cytosol	6.97	43.27
VIT_13s0067g03790.t01	Wine grape	plastid	24.11	43.17
VIT_13s0019g00060.t01	Wine grape	plastid	23.92	42.76
PGSC0003DMT400055897	Potato	cytosol	4.61	40.5
VIT_13s0067g03830.t01	Wine grape	plastid	16.29	39.32
KRH22502	Soybean	cytosol	4.99	30.29
Bra035927.1-P	Field mustard	mitochondrion, plastid	14.69	27.46
Bra012955.1-P	Field mustard	plastid	15.44	27.38
Bra027609.1-P	Field mustard	cytosol	7.25	26.74
Bra012513.1-P	Field mustard	cytosol	11.86	26.53
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	13.75	26.12
Bra021566.1-P	Field mustard	plastid	12.43	25.98
Bra002714.1-P	Field mustard	plastid	13.75	24.79
Bra001557.1-P	Field mustard	plastid	14.03	24.67
Bra020921.1-P	Field mustard	cytosol	9.32	24.44
Bra012515.1-P	Field mustard	extracellular	5.65	24.29
Bra021564.1-P	Field mustard	plastid	13.47	23.71
Bra020953.1-P	Field mustard	plastid	13.47	23.44
Bra021560.1-P	Field mustard	plastid	13.28	23.42
Bra002165.1-P	Field mustard	cytosol	12.24	23.38
Bra028251.1-P	Field mustard	cytosol	12.15	23.16
Bra001555.1-P	Field mustard	plastid	13.18	23.03
Bra039519.1-P	Field mustard	cytosol	11.96	22.8
Bra002968.1-P	Field mustard	plastid	8.29	22.8
Bra027079.1-P	Field mustard	plastid	7.06	22.52
Bra027931.1-P	Field mustard	plastid	12.71	22.46

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra025164	EnsemblPlants:Bra025164.1	EnsemblPlants:Bra025164.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M4E8Q8	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI000253F77A	:	:	:	:	:

Description

AT3G25820 (E=3e-267) ATTPS-CIN | ATTPS-CIN (terpene synthase-like sequence-1,8-cineole); (E)-beta-ocimene synthase/ myrcene synthase

Coordinates

chrA06:-:23005346..23023598

Molecular Weight (calculated)

123570.0 Da

IEP (calculated)

6.262

GRAVY (calculated)

-0.342

Length

1062 amino acids

Sequence
(BLAST)

0001: MTKMTPDNVS VDVLRRRSGN YQPSPWDHSY LLSINNKYAK EEKVIARDLL KEKVRKMLGA ETKNIFDVII DKIESETFKS DDINSIISLY EASYLSTKSD
0101: IKLREVIRPF AKKQIRKFVD GETCNLEVRE KAIHALEMPY HWRMRRLETR WYLDSYDNKH DTNLVLIEFA KLDFNIVQIA HQEDLKYVSS WDVNRLDELP
0201: EYMRLCFLIL FNEINSIGCD IFKYKNIDVI PFLRKSWADL CNTYLVEAKW YKKGYKPGVE EYMQNAWISI SAPTILIHFY CIFSDKISVQ ILETLSQHRQ
0301: EIVRCSATIL RLANDLGTSR DELARGDVLK SAQCYTHETG ASEEEAHAHV QQMICDTWDE INYETKMART YSLLSRGFVE AAVNLARMSQ CMYQYGDGHG
0401: CPDKAKTVER VMSLLVNPVP LRASWIDNPT RPMANLIDQS NSLFGELDEP LPIRHCTMPI RQQSSTMHSP LIFRNAFTGK NCRHRPKRFV CKSMTKTTPE
0501: NVSADVLSRR SGNYKPSPWD HRYLLSINNE HAKEEKVIAR DLLKEKVRKM LDVETKSRLE QLELIDELQK LGVSYHFEVE INDILMDFHH QNGRSILKCV
0601: KEEDLHATAL EFRLLRQHGF DVSEDIFDVI IDKIESETFK SDDINSIISL YEASYLSTKS DIKLREVIRP FATEQIRKFV DGETCNLEVR EKAIHALEMP
0701: YHWRMRRLET RWYIDAYEKK HDTNLVLIEF AKIDFNIVQI AHQEDLKYAS SWWKETCLVN HLPFVRDRIV ENYFVAVGII YEPQFGNARR IISIVNALVT
0801: TIDDIYDIYG TLEELEIFTA MVDNWDVNRL DELPEYMRLC FLILYNEVNS IGCDILKDKH INVIPFLKKS WADLCKTYLV EAKWYKKGYK PTVKEYIQNA
0901: WISISGQTIL IHFYCGFSDQ ISVQILETLA QHRQDIVRCS ATILRLANDL ATSPDELARG DVLKSVQCYM HETGATEEEA QAHVQQMICD TWEEMNYEAK
1001: MAGTSSLPRG FVEAAMNVAR MAQCIYQYGD GHGCPEEGKT VERFMYLVVN PVTNTKVISL LS

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.