Factsheet for Bra021563.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39124	Canola	cytoskeleton, cytosol, plastid	97.85	97.85
Bra021566.1-P	Field mustard	plastid	72.27	79.53
Bra021560.1-P	Field mustard	plastid	79.07	73.42
Bra021564.1-P	Field mustard	plastid	77.28	71.64
AT3G29410.1	Thale cress	plastid	72.27	67.0
Bra001555.1-P	Field mustard	plastid	60.64	55.76
Bra012955.1-P	Field mustard	plastid	58.86	54.92
Bra035927.1-P	Field mustard	mitochondrion, plastid	55.46	54.58
Bra001557.1-P	Field mustard	plastid	57.42	53.15
VIT_18s0001g04200.t01	Wine grape	cytosol	9.3	43.7
Bra027609.1-P	Field mustard	cytosol	21.29	41.32
PGSC0003DMT400050941	Potato	cytosol	18.25	40.8
Bra012513.1-P	Field mustard	cytosol	34.35	40.42
Bra020921.1-P	Field mustard	cytosol	28.26	39.01
Bra028251.1-P	Field mustard	cytosol	37.57	37.7
PGSC0003DMT400075074	Potato	cytosol	13.95	37.5
Bra002165.1-P	Field mustard	cytosol	37.21	37.41
Bra012515.1-P	Field mustard	extracellular	16.46	37.25
Bra002714.1-P	Field mustard	plastid	37.75	35.82
Bra039519.1-P	Field mustard	cytosol	35.42	35.55
PGSC0003DMT400070310	Potato	cytosol	19.5	35.05
Bra027931.1-P	Field mustard	plastid	37.57	34.94
Solyc01g101220.1.1	Tomato	cytosol	10.2	33.93
PGSC0003DMT400079785	Potato	cytosol	18.78	33.76
Bra002968.1-P	Field mustard	plastid	23.26	33.68
Solyc01g101190.2.1	Tomato	cytosol	33.09	33.51
Bra020953.1-P	Field mustard	plastid	35.78	32.79
PGSC0003DMT400047124	Potato	cytosol	17.71	31.83
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	16.99	30.65
VIT_18s0001g04510.t01	Wine grape	plastid	16.28	29.74
GSMUA_Achr6P24330_001	Banana	cytosol	6.98	27.66
Os02t0458100-01	Rice	plastid	19.32	27.62
GSMUA_Achr6P24340_001	Banana	cytosol	7.33	27.52
Bra025163.1-P	Field mustard	cytosol	26.83	26.79
Bra000727.1-P	Field mustard	plastid	23.61	25.93
Bra021082.1-P	Field mustard	cytosol	25.04	25.64
Bra038504.1-P	Field mustard	plastid	23.97	24.95
Bra000568.1-P	Field mustard	plastid	25.58	24.03
VIT_18s0001g05430.t01	Wine grape	cytosol	18.43	21.37
KRG93110	Soybean	mitochondrion	10.73	20.27
Bra027079.1-P	Field mustard	plastid	11.27	18.92
Bra025164.1-P	Field mustard	cytosol	26.12	13.75

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra021563	EnsemblPlants:Bra021563.1	EnsemblPlants:Bra021563.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M4DYG7	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI000254419D	:	:	:	:	:

Description

AT3G29410 (E=3e-236) | terpene synthase/cyclase family protein

Coordinates

chrA01:+:24474421..24476619

Molecular Weight (calculated)

65141.2 Da

IEP (calculated)

5.261

GRAVY (calculated)

-0.328

Length

559 amino acids

Sequence
(BLAST)

001: MTKHDLSCVQ AESSGYLEST RPLTYFSPST WGDYFLSVPI DDSEFEALEQ EIESVMKPEV RDILMCPHNN NKEKIRIIHL LISLAIAPYF ESEIEEILHQ
101: AFLKLDYLIS EEDDLETIAI MFEVFRLYQH KMSCDVFERF KGEDGKFKES VAHDVRGMLQ LYEAGHLGLP SEDIMDDALT FTRHHLGLLT GQETSPNLFE
201: QIQRTLYRAR YHNIEIVVAR QYISFYEQEE RHDEMLLKFA KLNFNFCQMH YIKELKIVTK LWKELGMTPK LSYIRDRIVE AFIFAVGLFF EPRYSRGRIH
301: ATILSKIASV VDDTCDAYAT LSEVISFHDA FQRWDLGAME ELPTNMRIVY KNTLEIVEEI DREMRARGKF GRLQPTIDEF KSLMKLYLTT AKWARAGHVP
401: SFEDYMENGS SSSGLDDYAA YAYISMDDCD EQQLKEWFNS KPKIFKASNN IFRLRNDIAT FEQEMSRGEV ANGVNCYMKQ HGVTKEAAVE VLRKMEREKF
501: KIMMEEFVLT KAVPRQILLR ATNSARMIDL YYKEGDGYGH PDQKLKDIIA SVFLHPVPL

Best Arabidopsis Sequence Match ( AT3G29410.1 )
(BLAST)

001: MEASKCFGPR TLPIIHNVPL CLKTNFSLFP CRLLQSQSLS SKKSTKHYLF RVKAETSGDL ESTRPLTYFS PSYWGDHFLS VSIDDSEFEA LEKEIETVFK
101: PKVRDMLMSP HSSDKERIRL IHLLISLGIA YYYENEIEEI LHKAYGKLAC LISDEDDLET IAIMFEVFRL YGHKMPCDVF ERFKSEDGKF KESLVGDVRG
201: LLQLYEAAHL GAPSEDIMDE ALSFARYHLE PLAGTETSSN LFKHVENVLY RARYHSIEIL VARQYISFYD QEEDQDETLL RFSKLNFNFC QMHYVKELKI
301: VTRWWKELGI ASKLPYSIRE RNVETYLGGL GVLFEPRYSL ARIFLAKLTL IMTVVDDTCD AYATLPEVQS LHDAFHRWDL RAMEELPRYM RIIYQSVFET
401: VEDIDREMIA RGKHGRLQLT IDEIKSLMIW YLGIAKWARS DQVPSFEDYM EIGTPSSALD DFASYGFIAM DDCDQKQLKE WFYSKPKIFH ALNALFRIRN
501: DIVTFEQEMS RGEVANGVNC YMKQHGVTKE AAVEELRKME RESYKIMIEE FMTSKAMPRQ ILVRPVNIAR VMDLFYKEAD GFGHPDQKLL QLIASLFLHP
601: IPL

Arabidopsis Description

TPS25Terpenoid synthase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.