Factsheet for Bra002165.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63249	Canola	cytosol	96.4	96.4
CDY71184	Canola	cytosol	57.73	96.11
Bra028251.1-P	Field mustard	cytosol	68.7	68.58
Bra039519.1-P	Field mustard	cytosol	67.99	67.86
Bra027609.1-P	Field mustard	cytosol	27.16	52.43
Bra012515.1-P	Field mustard	extracellular	21.94	49.39
Bra012513.1-P	Field mustard	cytosol	41.55	48.63
Bra002968.1-P	Field mustard	plastid	32.01	46.11
Bra020921.1-P	Field mustard	cytosol	31.65	43.46
Bra027931.1-P	Field mustard	plastid	45.86	42.43
Bra002714.1-P	Field mustard	plastid	44.78	42.27
Bra020953.1-P	Field mustard	plastid	45.68	41.64
VIT_18s0001g04200.t01	Wine grape	cytosol	8.27	38.66
Bra021566.1-P	Field mustard	plastid	34.71	37.99
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	37.41	37.21
PGSC0003DMT400050941	Potato	cytosol	16.73	37.2
Bra001557.1-P	Field mustard	plastid	39.75	36.59
Bra021560.1-P	Field mustard	plastid	38.67	35.71
PGSC0003DMT400075074	Potato	cytosol	13.31	35.58
Bra001555.1-P	Field mustard	plastid	38.49	35.2
Bra021564.1-P	Field mustard	plastid	38.13	35.16
Bra035927.1-P	Field mustard	mitochondrion, plastid	34.53	33.8
Bra012955.1-P	Field mustard	plastid	35.61	33.06
Solyc01g101190.2.1	Tomato	cytosol	31.65	31.88
PGSC0003DMT400079785	Potato	cytosol	17.45	31.19
PGSC0003DMT400070310	Potato	cytosol	16.73	29.9
PGSC0003DMT400047124	Potato	cytosol	16.55	29.58
Os02t0458100-01	Rice	plastid	19.78	28.13
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	15.11	27.1
Solyc01g101220.1.1	Tomato	cytosol	8.09	26.79
VIT_18s0001g04510.t01	Wine grape	plastid	14.03	25.49
Bra021082.1-P	Field mustard	cytosol	23.74	24.18
Bra000727.1-P	Field mustard	plastid	22.12	24.16
Bra038504.1-P	Field mustard	plastid	22.12	22.91
Bra000568.1-P	Field mustard	plastid	24.46	22.86
KRG93110	Soybean	mitochondrion	12.05	22.64
Bra025163.1-P	Field mustard	cytosol	22.3	22.14
Bra027079.1-P	Field mustard	plastid	11.87	19.82
GSMUA_Achr6P24340_001	Banana	cytosol	5.22	19.46
VIT_18s0001g05430.t01	Wine grape	cytosol	16.73	19.29
GSMUA_Achr6P24330_001	Banana	cytosol	4.86	19.15
Bra025164.1-P	Field mustard	cytosol	23.38	12.24

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra002165	EnsemblPlants:Bra002165.1	EnsemblPlants:Bra002165.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009987	GO:GO:0010333
GO:GO:0016106	GO:GO:0016829	GO:GO:0046872	GO:GO:0051762	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4CD84	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002543770	SEG:seg	:	:	:

Description

AT5G44630 (E=7e-239) | terpene synthase/cyclase family protein

Coordinates

chrA10:+:11155171..11157415

Molecular Weight (calculated)

65114.2 Da

IEP (calculated)

5.426

GRAVY (calculated)

-0.299

Length

556 amino acids

Sequence
(BLAST)

001: MEEVKRDQKS YLNFSKLLPS QWGDHFLNIS IADSDFDVLA REMEVLTPKL RKNIFTFSSR DKDAMKRSIL SIHILDSLGL AYIFEKEIVE TLKHAFEKID
101: ELITDENDLY TVSIMFRVFR IYGHNMLSDV FDRFKRNDGK FKESLMEDVQ GMLSFYEAAH FRTTTDHILD EALSFTLDYL ESLATDSKAI PPHILKHIQN
201: ALYIPQHQNV QVLVAREYLS FYEQEEDNDE TLLKLAKLNF KFLQLHYIQE LKIITTWWRE LDHTKNLPPG FRERTFECWF VGSMMYFEPQ FSLGRIMSAK
301: FFLLFTFLDD VCDTYGSIPE VESVVNCLER WDPEYMENLH GHMKTAFKFV MSVYKEFEEI LKSQGRSFAL EKMIEEFKIV ARTNLDLIKW ARAGQIPNFD
401: EYVEAGGAEA GSYATIACSI MGLGEIGKKE DFEWLLSRPK SVRYLARKAR LLDDITDFEE DMNKGYTANA LNYYMKQHGV TKKEASREFH KMIGDINKLV
501: NEECLKTTNI SRPILMQVVN FGRMVNILYT SDDLYNHREG KLKDYLTALL VDPIHL

Best Arabidopsis Sequence Match ( AT5G44630.1 )
(BLAST)

001: MEALGNFDYE SYTNFTKLPS SQWGDQFLKF SIADSDFDVL EREIEVLKPK VRENIFVSSS TDKDAMKKTI LSIHFLDSLG LSYHFEKEIE ESLKHAFEKI
101: EDLIADENKL HTISTIFRVF RTYGYYMSSD VFKIFKGDDG KFKESLIEDV KGMLSFYEAV HFGTTTDHIL DEALSFTLNH LESLATGRRA SPPHISKLIQ
201: NALHIPQHRN IQALVAREYI SFYEHEEDHD ETLLKLAKLN FKFLQLHYFQ ELKTITMWWT KLDHTSNLPP NFRERTVETW FAALMMYFEP QFSLGRIMSA
301: KLYLVITFLD DACDTYGSIS EVESLADCLE RWDPDYMENL QGHMKTAFKF VMYLFKEYEE ILRSQGRSFV LEKMIEEFKI IARKNLELVK WARGGHVPSF
401: DEYIESGGAE IGTYATIACS IMGLGEIGKK EAFEWLISRP KLVRILGAKT RLMDDIADFE EDMEKGYTAN ALNYYMNEHG VTKEEASREL EKMNGDMNKI
501: VNEECLKITT MPRRILMQSV NYARSLDVLY TADDVYNHRE GKLKEYMRLL LVDPILL

Arabidopsis Description

BSAlpha-barbatene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q4KSH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.