CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14934	Canola	cytosol	3.29	68.75
CDY63249	Canola	cytosol	100.0	60.07
Bra002165.1-P	Field mustard	cytosol	96.11	57.73
CDX74453	Canola	cytosol	67.66	42.56
CDX95274	Canola	cytosol	16.47	41.35
CDY14933	Canola	cytosol	57.48	39.34
CDY69236	Canola	cytosol	47.01	32.44
PGSC0003DMT400079785	Potato	cytosol	29.04	31.19
CDY68962	Canola	cytosol	46.41	30.75
PGSC0003DMT400070310	Potato	cytosol	27.54	29.58
CDY23121	Canola	cytosol	32.93	28.95
CDY06577	Canola	cytosol	28.14	28.66
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	32.04	28.08
CDX98661	Canola	cytosol	46.41	27.83
CDY42473	Canola	cytosol	41.62	24.73
CDY41707	Canola	plastid	42.22	24.23
CDY49723	Canola	plastid	41.92	23.49
CDX98659	Canola	plastid	43.41	23.46
CDY13053	Canola	extracellular	38.62	23.33
CDX76471	Canola	plastid	41.62	23.05
CDY66920	Canola	cytosol	22.75	22.96
CDY09324	Canola	plastid	41.02	22.87
CDX82478	Canola	cytosol	36.53	22.72
CDX76457	Canola	plastid	40.12	22.3
CDY70719	Canola	cytosol	23.05	22.13
CDY54565	Canola	plastid	38.02	22.09
CDY53648	Canola	cytosol	16.77	21.88
CDY53129	Canola	cytosol	16.77	21.88
CDX82475	Canola	plastid	38.02	21.86
CDY62515	Canola	cytosol	26.05	21.7
CDY54750	Canola	cytosol	25.75	21.45
CDY02143	Canola	plastid	35.33	21.34
CDY39124	Canola	cytoskeleton, cytosol, plastid	35.63	21.29
PGSC0003DMT400075074	Potato	cytosol	13.17	21.15
CDX75776	Canola	plastid	37.13	21.12
CDY27296	Canola	cytosol	12.28	21.03
CDX98470	Canola	plastid	36.23	20.72
CDY39119	Canola	plastid	36.53	20.27
CDX87217	Canola	plastid	35.93	19.97
CDY12909	Canola	cytosol	13.77	19.83
Solyc01g101220.1.1	Tomato	cytosol	9.88	19.64
GSMUA_Achr6P24340_001	Banana	cytosol	8.68	19.46
CDY32356	Canola	plastid	35.93	19.35
GSMUA_Achr6P24330_001	Banana	cytosol	8.08	19.15
Solyc01g101190.2.1	Tomato	cytosol	31.44	19.02
CDX95273	Canola	plastid	21.56	17.18
PGSC0003DMT400047124	Potato	cytosol	14.67	15.76
PGSC0003DMT400050941	Potato	cytosol	10.48	14.0
CDY18347	Canola	cytosol	6.89	13.86
CDX90785	Canola	plastid	24.55	13.83
CDX83560	Canola	plastid	23.35	13.81
CDY21487	Canola	plastid	24.25	13.61
CDX83208	Canola	plastid	23.95	13.45
CDX76827	Canola	plastid	21.56	12.88
CDX83558	Canola	plastid	22.46	12.73
CDX75775	Canola	plastid	18.26	12.6
CDY68676	Canola	cytosol	14.07	12.5
CDY13587	Canola	plastid	21.86	12.39
CDY67821	Canola	cytosol	7.19	12.37
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	22.75	11.13
CDY13589	Canola	plastid	18.26	10.95
Os02t0458100-01	Rice	plastid	12.57	10.74
VIT_18s0001g04200.t01	Wine grape	cytosol	3.29	9.24
CDY15827	Canola	cytosol	4.19	9.03
CDY09325	Canola	plastid	6.59	8.15
KRG93110	Soybean	mitochondrion	7.19	8.11
CDY61957	Canola	plastid	8.38	7.41
CDX82477	Canola	plastid	5.99	6.67
CDY68788	Canola	endoplasmic reticulum, golgi	7.78	6.19
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	5.69	6.13
VIT_18s0001g05430.t01	Wine grape	cytosol	7.78	5.39
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	3.89	5.18
VIT_18s0001g04510.t01	Wine grape	plastid	4.19	4.58
CDY12910	Canola	plastid	0.0	0.0
CDY01639	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	MapMan:9.1.4.2	GO:A0A078JWR2	UniProt:A0A078JWR2	EnsemblPlants:CDY71184	ProteinID:CDY71184
ProteinID:CDY71184.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0010333
GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00011947001	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF22	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synthase_metal-bd	UniParc:UPI0004EE4060	SEG:seg

Description

BnaAnng36420DBnaAnng36420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWR2]

Coordinates

chrLK044822:-:1132..2798

Molecular Weight (calculated)

38904.8 Da

IEP (calculated)

5.669

GRAVY (calculated)

-0.347

Length

334 amino acids

Sequence
(BLAST)

001: KQEEDNDETL LKLAKLNFKF LQLHYIQELK IITTWWRELD HTKNLPHGFR ERTFESWFVG SMMYFEPQFS LGRIMSAKFI LLLAFLDDAC DTYGSIPEVE
101: SVVNCLERWD PEYMENLHGH MKTAFKFVMS VYKEFEEILK SQGRSFALEK MIEEFKIVAR TNLDLIKWAR AGQIPNFDEY VEAGGAEAGS YATIACSIMG
201: LGEIGKKEDF EWLLSRPKSV RYLARKTRLL DDITDFEEDM NKGYTANALN YYMKQHGVTK KEASGEFHKM IGDINKIVNE ECLKTTNISR PVLMQVVNYG
301: RMVNILYTSD DVYNHREGKL KDYLTALLVD PIHL

Best Arabidopsis Sequence Match ( AT5G44630.1 )
(BLAST)

001: MEALGNFDYE SYTNFTKLPS SQWGDQFLKF SIADSDFDVL EREIEVLKPK VRENIFVSSS TDKDAMKKTI LSIHFLDSLG LSYHFEKEIE ESLKHAFEKI
101: EDLIADENKL HTISTIFRVF RTYGYYMSSD VFKIFKGDDG KFKESLIEDV KGMLSFYEAV HFGTTTDHIL DEALSFTLNH LESLATGRRA SPPHISKLIQ
201: NALHIPQHRN IQALVAREYI SFYEHEEDHD ETLLKLAKLN FKFLQLHYFQ ELKTITMWWT KLDHTSNLPP NFRERTVETW FAALMMYFEP QFSLGRIMSA
301: KLYLVITFLD DACDTYGSIS EVESLADCLE RWDPDYMENL QGHMKTAFKF VMYLFKEYEE ILRSQGRSFV LEKMIEEFKI IARKNLELVK WARGGHVPSF
401: DEYIESGGAE IGTYATIACS IMGLGEIGKK EAFEWLISRP KLVRILGAKT RLMDDIADFE EDMEKGYTAN ALNYYMNEHG VTKEEASREL EKMNGDMNKI
501: VNEECLKITT MPRRILMQSV NYARSLDVLY TADDVYNHRE GKLKEYMRLL LVDPILL

Arabidopsis Description

BSAlpha-barbatene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q4KSH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.